Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0017 ATGCCTCCTCAACTCCGAACCAGAAAAACTAAAACCAAACAAGACCCGAATCCGAATCAAAACCCGAACCCGATCGCTAAACCCGAACCCGCTACACGAGGTAGAAGAGGTAGACCTGCTAGAAATCGTAACAACACCATCGCCGCCGCAGCCGCACGTGATCAAGTACAAGAACAACAACAACAACAAAACGAACAACCTCACGTGCCGGAACAACCTCAAATTAGGGTTTCTAATAAGCTAGAGATTATGGATGATGACTGTGATAGCGGTGGTGGGAGAACCGCCGCTGATAAGGGTCCGGTGGCTGAAGATGAAGGGAGTACACCGCCTATTCCTGAAAAAGTTCAGGTGGGTGGTTCACCGATGTACAGAGTAGATAGGAAGCTAGGGAAAGGAGGATTTGGACAAGTTTATGTTGGTCGTCGTATTGGTGCCGGAGCCGGTGCTGTTGAGGTGGCTTTGAAATTTGAGCATAAAACCAGCAAAGGGTGTAATTATGGACCTCCTTACGAGTGGCAGGTTTACAATGTATTAGGAGGTAGCCATGGTGTCCCACGAGTTCATTACAAGGGACGGCAAGGTGATTGGTATGTCATGGTCATGGATATTCTTGGCCCTAGTTTATGGGATGTTTGGAATAACAAGACACACACGATGTCTGCTGAAATGGTGTCGTGCATAGCAATCGAGGCTGTTTCCATATTAGAGAAGATGCATTCTAGAGGATACGTGCATGGTGATGTAAAACCTGAGAACTTTTTGCTCGGCCCTCCGGGAACTCATGAAGAGAAAAAGCTTTTTCTGGTTGATCTTGGTTTAGCAACTCGTTGGCGTGATAATTCGTCTGGTCTTCATGTTGATTACGATCAGCGTCCAGATGTATTTAGGGGAACAGTTCGTTATGCTAGTGTACATGCTCATCTTGGTAGGACAGGTAGCAGAAGAGATGATTTGGAATCTCTTGCATACACGCTAATCTTCCTTCTTCGTGGACGGCTACCCTGGCAAGGATACCAGGGTGAAAATAAAGGATTTCTTGTTTGCAAGAAGAAAATGGCCACCTCGCCAGAAAATATGTGTATCCTCTGTCCCGCACCTTTTCGGCAGTTCATTGAGTTCGTGGTGAATTTGAAGTTTGACGAAGAACCAAATTATGCCAAATATATATCACTTTTTGATGGAATTGTTGGTCCAAATCCAGACATTAGACCCATAAACACTGACGGTGCTCAGAAGCTTATTTATCAGGTTGGACAGAAGAGAGGACGGTTGACCATGGAAGGAGATGATGATGAGCAGCCAAAGAAGAAAGTCAGAATGGGAATGCCAGCAACACAATGGATTAGTGTGTACAATGCACGCCGACCTATGAAGCAAAGGTACCATTACAATGTTGCTGATGTGCGGTTGTCCCAACACATCGAAAAGGGATATGAAGATGGGTTATTTATCAGTAGTGTAGGTTGTTGTTCTAACCTTTGGGCACTGATTATGGATGCCGGCACTGGTTTCACTGCACAAGTTTATGAACTCTCATCCTTCTTCCTTCACAAGGAATGGATTATGGAACAGTGGGAAAAAAATTATTATATTAGTGCCATAGCAGGATCTAATAGCGGGAGCTCGTTGGTTGTAATGTCGAAAGGGACCCAATACTTGCAGCAATCCTATAAGGTCAGTGAATCATTTCCATTCAAGTGGATTAATAAAAAATGGAAAGAAGGATTTTTCGTCACTGCTATGGCCACCGCTGGAAGTAGATGGGCAATTGTTATGTCCCGTGGTGCTGGATTTTCAGATCAGGTTGTGGAGCTTGATTTCCTGTATCCTAGTGAAGGTATTCATCGAAGGTGGGACAATGGTTACCGCATCACTTCAACTGCTGCTACATATGACCAGGCTGCTCTTGTTCTTAGTATTCCAAGAAGAAAACCGACTGATGAAACTCAAGAAACACTTCGCACATCTGACTTTCCTAGTACTCATGTCAAGGAAAAATGGGCAAAGAATCTCTACATTGCATCTATTTGTTATGGAAGAACTGTTTCATGA 2055 0.4428 MPPQLRTRKTKTKQDPNPNQNPNPIAKPEPATRGRRGRPARNRNNTIAAAAARDQVQEQQQQQNEQPHVPEQPQIRVSNKLEIMDDDCDSGGGRTAADKGPVAEDEGSTPPIPEKVQVGGSPMYRVDRKLGKGGFGQVYVGRRIGAGAGAVEVALKFEHKTSKGCNYGPPYEWQVYNVLGGSHGVPRVHYKGRQGDWYVMVMDILGPSLWDVWNNKTHTMSAEMVSCIAIEAVSILEKMHSRGYVHGDVKPENFLLGPPGTHEEKKLFLVDLGLATRWRDNSSGLHVDYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPENMCILCPAPFRQFIEFVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTDGAQKLIYQVGQKRGRLTMEGDDDEQPKKKVRMGMPATQWISVYNARRPMKQRYHYNVADVRLSQHIEKGYEDGLFISSVGCCSNLWALIMDAGTGFTAQVYELSSFFLHKEWIMEQWEKNYYISAIAGSNSGSSLVVMSKGTQYLQQSYKVSESFPFKWINKKWKEGFFVTAMATAGSRWAIVMSRGAGFSDQVVELDFLYPSEGIHRRWDNGYRITSTAATYDQAALVLSIPRRKPTDETQETLRTSDFPSTHVKEKWAKNLYIASICYGRTVS* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0017 684 ProSiteProfiles Protein kinase domain profile. 124 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0017 684 ProSitePatterns Protein kinases ATP-binding region signature. 130 156 IPR017441 GO:0005524
Mtr1g0017 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
Mtr1g0017 684 SMART serkin_6 124 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0017 684 MobiDBLite consensus disorder prediction 1 119 - -
Mtr1g0017 684 SUPERFAMILY Protein kinase-like (PK-like) 124 399 IPR011009 -
Mtr1g0017 684 Gene3D Transferase(Phosphotransferase) domain 1 102 437 - -
Mtr1g0017 684 CDD STKc_CK1 123 393 - -
Mtr1g0017 684 PANTHER CASEIN KINASE-RELATED 82 658 - -
Mtr1g0017 684 MobiDBLite consensus disorder prediction 48 73 - -
Mtr1g0017 684 Pfam Protein kinase domain 124 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0017 684 PANTHER - 82 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0017 Mtr-Chr1 233998 239547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0017 123 279 EF-hand Containing Proteins AT4G35310 31.902 1.31e-08 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Mtr1g0017 Pkinase 4.4e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0017 - - vvi:100254265 1108.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0017 1 233998 239547 Mtr1g0017 1 233998 239547 ECH
Mtr3g3796 3 51779196 51784855 Mtr1g0017 1 233998 239547 ECH