LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr1g0013	ATGGTAAATCATACTGTTGTTTTATCAATCTTTGTGCCTTTAGTTTTCACATCATTAATTACCTTAGTGTGTGATGCTATTGAAAGTGGCGATGAAAGTAGTAAACTTTACATCGTGTACATGGGCTCACTTCCTAAGGGAGCATCATATTCCCCAACCTCTCACCATATCAGCTTGTTGCAACATGTTATGGATGGTAGTGACATAGAAAATCGCTTAGTTCGAAGTTACAAAAGGAGTTTCAATGGTTTTGCTGCCATACTCAATGATCAAGAAAGGGAAAAACTTGTCCGAATGAGAGGTGTGGTCTCAGTTTTTCCAAACCAAGACTTTCACGTTCAAACCACAAGGTCGTGGGACTTCGTTGGACTTCCTCACTCATTTAAAAGATATCAAACTATTGAGAGTGATTTGGTGATTGGAGTCATTGATAGTGGAATATGGCCAGAATCTAAAAGTTTCAATGATAAAGGTCTTGGTCAAATCCCAATAAAGTGGAGGGGAGTTTGTGCAGGTGGTAGTGACTTCAATTGTAACAAGAAGATCATCGGAGCACGATTTTACGGCATTGGAGATGTGAGTGCAAGAGATGAATTGGGTCATGGAACCCATACATCATCGATAGTAGGTGGACGTGAGGTAAAAGGTGCGAGCTTTTATGGTTATGCAAAAGGCATTGCAAGAGGTGGAGTTCCATCTTCAAGGATTGCTGCATACAAAGTTTGCAAAGAATCAGGTTTATGTACTGGTGTTGGTATACTTGCTGCATTTGATGATGCCATTGATGATGGAGTTGATGTCATTACTATCTCTATTTGTGTCCCTACTTTTTATGATTTTTTGATTGACCCTATTGCTATTGGTTCTTTTCATGCCATGGAGAAAGGAATACTCACAGTGCAGGGTGTAGGAAATTCTGGCCCTAGACCAAGTACTGTTTGTAGTGTATCACCTTGGTTATTTAGTGTTGCTGGAACTACCATAGATCGACAATTCATTGCTAAGCTCATTCTTGGAAATGGAAAGACGTATATTGGTAAGTCAATCAATATAACACCTTCAAATGGCACCAAATTTCCAATAGTTGTGTGTAACGCTAAAGCTTGCTCAGATGATGATGATGGAATTACATTTTCCCCAGAAAAGTGTAATTCTAAAGACAAAAAGAGGGTGACAGGTAAACTTGTTTTATGTGGATCGCGATCAGGTCAAAAATTGGCTTCGGTGAGTAGTGCAATTGGTTCAATCCTTAATGTTTCATACCTTGGTTTTGAAACTGCATTTGTCACTAAGAAGCCTACACTTACCCTGGAATCAAAAAACTTTGTTCGAGTTCAACATTACACAAATTCCACCAAAGACCCTATCGCTGAGCTCTTAAAGAGTGAGATATTCCATGACATCAAAGCTCCTAAAGTTGTCACTTTCTCTTCACGTGGCCCAAATCGTTATGTTCCAGAAATTATGAAACCAGATATAAGTGCCCCAGGAACGGAAATCTTGGCTGCATATTCACCTTTAGCATCACCCTCATCCGATATAAATGATAAGAGAAAGTTTAAATACAACATATTATCTGGAACCTCTATGGCATGCCCTCATGCCGCTGGAGTTGCTGCATATGTGAAATCATTTCATCCAGATTGGTCACCTGCAGCTATAAAATCCGCTATCATGACAACTGCTACAACAATGAAAGGTACTTATGATGATTTGGCTGGTGAATTTGCTTATGGATCTGGTAATATCAATCCACAACAAGCCCTTCACCCTGGACTTGTTTATGACATCACTAAGCAAGATTATGTGAAAATGCTTTGTAATTATGGTTATGGTGCTGACAAAATTAAACAGATTAGTGGAGATAATTCAAGTTGCCATGGATATCCTGAAAGATCATTGGTGAAAGATATAAACTATCCTGCAATGGTTATTCCTGTACATAAGCATTTCAATGTAAAGGTTCATAGAACAGTCACAAATGTTGGCTTTCCTAACTCAACCTACAAAGCTACTCTCAGCCATCATGATCCAAAAATCAAGATTAGTGTGGAACCAAAATTTCTGTCTTTCAAATCATTATATGAGAAACAATCATTTGTTATTGTTGTTGTTGGAAGAGTAAAATCAAATCAAACTGTGTTTTCCTCATCACTTGTTTGGTCAGATGGAATCCACAATGTTAGGAGTCCCATCATTGTTCAAATATTATCTCTATAG	2220	0.3829	MVNHTVVLSIFVPLVFTSLITLVCDAIESGDESSKLYIVYMGSLPKGASYSPTSHHISLLQHVMDGSDIENRLVRSYKRSFNGFAAILNDQEREKLVRMRGVVSVFPNQDFHVQTTRSWDFVGLPHSFKRYQTIESDLVIGVIDSGIWPESKSFNDKGLGQIPIKWRGVCAGGSDFNCNKKIIGARFYGIGDVSARDELGHGTHTSSIVGGREVKGASFYGYAKGIARGGVPSSRIAAYKVCKESGLCTGVGILAAFDDAIDDGVDVITISICVPTFYDFLIDPIAIGSFHAMEKGILTVQGVGNSGPRPSTVCSVSPWLFSVAGTTIDRQFIAKLILGNGKTYIGKSINITPSNGTKFPIVVCNAKACSDDDDGITFSPEKCNSKDKKRVTGKLVLCGSRSGQKLASVSSAIGSILNVSYLGFETAFVTKKPTLTLESKNFVRVQHYTNSTKDPIAELLKSEIFHDIKAPKVVTFSSRGPNRYVPEIMKPDISAPGTEILAAYSPLASPSSDINDKRKFKYNILSGTSMACPHAAGVAAYVKSFHPDWSPAAIKSAIMTTATTMKGTYDDLAGEFAYGSGNINPQQALHPGLVYDITKQDYVKMLCNYGYGADKIKQISGDNSSCHGYPERSLVKDINYPAMVIPVHKHFNVKVHRTVTNVGFPNSTYKATLSHHDPKIKISVEPKFLSFKSLYEKQSFVIVVVGRVKSNQTVFSSSLVWSDGIHNVRSPIIVQILSL*	740

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr1g0013	739	Pfam	Subtilase family	136	579	IPR000209	GO:0006508\|GO:0008236
	Mtr1g0013	739	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	36	736	IPR045051	-
	Mtr1g0013	739	PANTHER	SUBTILISIN-LIKE PROTEASE SBT4.3	36	736	-	-
	Mtr1g0013	739	Gene3D	-	329	466	-	-
	Mtr1g0013	739	SUPERFAMILY	Subtilisin-like	135	593	IPR036852	GO:0004252\|GO:0006508
	Mtr1g0013	739	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	23	113	IPR037045	-
	Mtr1g0013	739	PRINTS	Subtilisin serine protease family (S8) signature	135	154	IPR015500	-
	Mtr1g0013	739	PRINTS	Subtilisin serine protease family (S8) signature	197	210	IPR015500	-
	Mtr1g0013	739	PRINTS	Subtilisin serine protease family (S8) signature	526	542	IPR015500	-
	Mtr1g0013	739	CDD	Peptidases_S8_3	111	563	IPR034197	-
	Mtr1g0013	739	Pfam	Fibronectin type-III domain	637	734	IPR041469	-
	Mtr1g0013	739	Gene3D	Peptidase S8/S53 domain	137	602	IPR036852	GO:0004252\|GO:0006508
	Mtr1g0013	739	Pfam	Peptidase inhibitor I9	37	112	IPR010259	-
	Mtr1g0013	739	Gene3D	-	606	737	-	-
	Mtr1g0013	739	ProSiteProfiles	Serine proteases, subtilase domain profile.	118	589	-	-
	Mtr1g0013	739	ProSitePatterns	Serine proteases, subtilase family, serine active site.	527	537	IPR023828	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr1g0013	Mtr-Chr1	174740	177470	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr1g0013	24	738	Subtilisin-like Serine Gene Family	AT5G59100	50.621	0.0	696

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr1g0013	-		-	mtr:MTR_1g006990	1481.85