Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi2000031g0023 ATGTATGAAGACAATTGTAAGTTAGATACTTTAAGCTTCTGTCTCGTGTGGTTCTTGGTGCCTACCGCCTGCATGATGCAGCTCATGTTGCTTCTTCTCTTTCTTTTTGCTCCGATCACAGTTCTTTCCGACGACCCAGCCTTCAACGACGACGTGTTGGGTTTGATTGTCTTCAAGGCGGGTTTGCAAGACCCGAAAGGTAAGCTCTCTACTTGGAACGAAGATGATAATAATCCCTGTAAGTGGGTTGGAGTCAAATGTGATCCAACGACCAATCGGGTCTCTGCCATTGTACTAGACGCCTTTTCTCTTTCTGGGCACATTGATCGAGGCCTCCTGAGATTACAGTCCCTTCAAATTCTCTCACTTTCCAAGAACAACTTCTCTGGGTCCATCAACCCAGATCTTCTTCGCCTTGGGAATTTGCAAGTATTGGACTTTAGTGAGAACAACCTCTCTGGGTCTATACCAGAAGGGTTCTTCCACCAATGTGGGTCCTTAAGATCAGTTTCATTTGCTAAAAACCATCTTAATGGTAAGATTCCTGATTTCTTGAGTTCCTGCTCCATGTTAGTAACTCTTAACTTATCTTCCAATCAGCTAAATGGGAATTTACCTTCTGGGATATGGTTTTTGAGACAACTACAGTCACTTGATCTGTCAAATAACTTGCTGGAGGGAGAGATTCCTGAGGGAATTAAGAATTTGTATGATTTGAAGGAGTTAAATCTGCAGAGAAATCGCTTCATTGGAAGGCTTCCTGGTGACATTGGAGGATGCATACTTTTAAAGTCACTTGATTTCAGTGATAATTTTCTCTCTGGGACAATCCCTGAGTCAATGCAGGGACTCAACTCCTGCACATCCGTCAATTTACGCGGTAATTTATTCACAGGAGCAGTTCCTGAGTGGATTGGAGAATTAAAAAATCTGGAGATGTTGGATCTTTCAGCAAATATATTTTCTGGTTGGATTCCAAAATCAATAGGCAAGCTCAACTCACTGAATGAATTAAATCTATCCCGGAATCATTTTACAGGAAGCATGCCGGAATCAATGGTAACCTGTGTTAAGCTTTTGGCTCTAGACATCAGCCAAAATCAGTTAGAAGGGCGTCTTCCCCCATGGATTTTCAGGATGGGCTCACAAAGTGTTTCACTTTCGGGGAACAGCTTCAATAGCAGCAATTATCCTTTATTTACCTCCACACCTGAATCTTATCATGGTCTTCAGGTTTTGGATTTGTCATCAAATGCGTTTTCTGGTGAACTTCCATCTAATATTGGGGACCTTAGTAGCTTGCAAGTATTAAATATGTCCGCTAACAATATCTCTGGTCCTATTCCAGCGGGTATAGGAGAACTTAAATCTTTATACATTCTTGACTTGAGTGACAACAAACTTAACGGAAGCATTCCTCCTGAACTAGAAGCGGCTGTTTCACTCAGTGAACTGCGGTTACAGAACAACTTCCTGAGTGGTGAAATCCCAGCCCAAATCGAAAAGTGCTCTTTGCTAACAACTTTGATTCTTTCTCACAACAAACTTACTAGTTCAATCCCAGCAGCCATTGCAAACCTGACTAATCTTCAGTATGTGGACTTGTCATGGAATGAACTCTCTGGAAGCTTGCCCAAGAATCTCTCAAATCTTTCCCACCTTTTATTTTTTAATGTCTCCTACAATCACCTTCAAGGGGAGCTACCAGTGGGCGGCTTCTTCAATGTCATCTCTCCCGCATCTGTCGCCGGTAATCCATCCTTATGTGGTTCTGTTGTCAATCACTCCTGCCCTTCAGTCCATCCCAAGCCTATTGTTCTGAACACCAATTCTTCTTACTCCAACTCCAACTCCTCCTCTCAAAACCATGGTCATAAAAAGATCATACTAAGTATTTCTTCTCTTATTGCTATTGGTGCTGCTGCTTTTATCACTATTGGTGTGGTGGCCATTACTGTCCTAAATGCCCATGTTCGTCATTCAATGTCTCATTCTGCTGCCCCATTTGCATTATCTGGTGGTGAGGAGTATAGTTGTTCCCCTGCAAATGATCCAAACTATGGCAAGCTTGTTATGTTTTCTGGTGATGCTGGTTTTGATGATGGGGCAAATAATCTCCTAAACAAAGACAGTATAATAGGTCGTGGTGGATTTGGAATTGTTTATCACACTGTCCTTCGAGATGGGAATTCTGTTGCAATCAAGAAGCTTACAGTCTCTGGATTGATCAAGTCACAAGAAGACTTTGAGAGGGAAGTGAAAAATCTTGCGACAGTCAAACACCAGAATCTTGTGGGACTTAAAGGGTATTACTGGACTTCATCCTTGCAGCTCCTTATTTATGAGTATCTATCCAGAGGGAGTCTGCATAAGCTTCTACATGAAGAAGACGAGCATAGCAGCAACATGCTTTCTTGGCGACAAAGGTTCACGATTATTCTTGGAATGGCGAAGGGGTTGGCTCATTTGCATCAAATGAATGTAATTCACTACAATCTAAAATCAACAAATGTTTTGATTGATTGCTCTGGTGAGCCAAAAATAGGAGATTTTGGCTTGGTGAGGCTGTTGCCAGTGCTAGACCATTGTGTTTTGAGCAGCAAAATTCAAAGTGCACTGGGTTACATGGCCCCTGAGTTTGCATGCCGGACAGTGAAGATAACTGAGAAATGTGATGTGTATGGTTTTGGGATCATGGTTCTTGAGGTGGTGACCGGGAAAAGGCCTGTGGAATACATGGAGGATGATGTGGTTGTTTTGTGTGATATGGTAAGGGGTGCATTGGAGGAAGGCAGGGTGGAGCAATGTGTGGACGGGAGGCTTCTGGGTAATTTTGCTGCTGAGGAAGCGATCCCTGTCATAAAATTGGGATTAATTTGTGCATCACAAGTGCCTTCAAACCGCCCAGATATGGCCGAGGCTGTTAATATCTTAGAGTTGATCCAATGCCCTTCAGAAGGACAAGAGGAATTAGAATGA 2979 0.4267 MYEDNCKLDTLSFCLVWFLVPTACMMQLMLLLLFLFAPITVLSDDPAFNDDVLGLIVFKAGLQDPKGKLSTWNEDDNNPCKWVGVKCDPTTNRVSAIVLDAFSLSGHIDRGLLRLQSLQILSLSKNNFSGSINPDLLRLGNLQVLDFSENNLSGSIPEGFFHQCGSLRSVSFAKNHLNGKIPDFLSSCSMLVTLNLSSNQLNGNLPSGIWFLRQLQSLDLSNNLLEGEIPEGIKNLYDLKELNLQRNRFIGRLPGDIGGCILLKSLDFSDNFLSGTIPESMQGLNSCTSVNLRGNLFTGAVPEWIGELKNLEMLDLSANIFSGWIPKSIGKLNSLNELNLSRNHFTGSMPESMVTCVKLLALDISQNQLEGRLPPWIFRMGSQSVSLSGNSFNSSNYPLFTSTPESYHGLQVLDLSSNAFSGELPSNIGDLSSLQVLNMSANNISGPIPAGIGELKSLYILDLSDNKLNGSIPPELEAAVSLSELRLQNNFLSGEIPAQIEKCSLLTTLILSHNKLTSSIPAAIANLTNLQYVDLSWNELSGSLPKNLSNLSHLLFFNVSYNHLQGELPVGGFFNVISPASVAGNPSLCGSVVNHSCPSVHPKPIVLNTNSSYSNSNSSSQNHGHKKIILSISSLIAIGAAAFITIGVVAITVLNAHVRHSMSHSAAPFALSGGEEYSCSPANDPNYGKLVMFSGDAGFDDGANNLLNKDSIIGRGGFGIVYHTVLRDGNSVAIKKLTVSGLIKSQEDFEREVKNLATVKHQNLVGLKGYYWTSSLQLLIYEYLSRGSLHKLLHEEDEHSSNMLSWRQRFTIILGMAKGLAHLHQMNVIHYNLKSTNVLIDCSGEPKIGDFGLVRLLPVLDHCVLSSKIQSALGYMAPEFACRTVKITEKCDVYGFGIMVLEVVTGKRPVEYMEDDVVVLCDMVRGALEEGRVEQCVDGRLLGNFAAEEAIPVIKLGLICASQVPSNRPDMAEAVNILELIQCPSEGQEELE 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi2000031g0023 992 Gene3D Ribonuclease Inhibitor 328 603 IPR032675 -
Mibi2000031g0023 992 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 328 601 - -
Mibi2000031g0023 992 SMART LRR_sd22_2 212 235 - -
Mibi2000031g0023 992 SMART LRR_sd22_2 139 162 - -
Mibi2000031g0023 992 SMART LRR_sd22_2 263 286 - -
Mibi2000031g0023 992 SMART LRR_sd22_2 308 334 - -
Mibi2000031g0023 992 SMART LRR_sd22_2 455 478 - -
Mibi2000031g0023 992 SMART LRR_sd22_2 527 553 - -
Mibi2000031g0023 992 SMART serkin_6 707 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi2000031g0023 992 SUPERFAMILY RNI-like 277 575 - -
Mibi2000031g0023 992 Gene3D Ribonuclease Inhibitor 48 327 IPR032675 -
Mibi2000031g0023 992 Pfam Leucine rich repeat 481 540 IPR001611 GO:0005515
Mibi2000031g0023 992 Pfam Leucine rich repeat 288 345 IPR001611 GO:0005515
Mibi2000031g0023 992 Pfam Leucine rich repeat 409 468 IPR001611 GO:0005515
Mibi2000031g0023 992 PANTHER OS05G0588300 PROTEIN 409 499 - -
Mibi2000031g0023 992 PRINTS Leucine-rich repeat signature 215 228 - -
Mibi2000031g0023 992 PRINTS Leucine-rich repeat signature 455 468 - -
Mibi2000031g0023 992 SUPERFAMILY Protein kinase-like (PK-like) 709 982 IPR011009 -
Mibi2000031g0023 992 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 701 783 - -
Mibi2000031g0023 992 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 784 987 - -
Mibi2000031g0023 992 Pfam Leucine rich repeat N-terminal domain 49 88 IPR013210 -
Mibi2000031g0023 992 SUPERFAMILY L domain-like 74 327 - -
Mibi2000031g0023 992 Gene3D Transferase(Phosphotransferase) domain 1 784 990 - -
Mibi2000031g0023 992 Gene3D Phosphorylase Kinase; domain 1 701 783 - -
Mibi2000031g0023 992 ProSitePatterns Protein kinases ATP-binding region signature. 713 736 IPR017441 GO:0005524
Mibi2000031g0023 992 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 49 327 - -
Mibi2000031g0023 992 Pfam Leucine Rich Repeat 214 236 IPR001611 GO:0005515
Mibi2000031g0023 992 SMART LRR_typ_2 139 163 IPR003591 -
Mibi2000031g0023 992 SMART LRR_typ_2 236 260 IPR003591 -
Mibi2000031g0023 992 SMART LRR_typ_2 455 479 IPR003591 -
Mibi2000031g0023 992 SMART LRR_typ_2 212 235 IPR003591 -
Mibi2000031g0023 992 SMART LRR_typ_2 431 453 IPR003591 -
Mibi2000031g0023 992 SMART LRR_typ_2 551 575 IPR003591 -
Mibi2000031g0023 992 SMART LRR_typ_2 332 356 IPR003591 -
Mibi2000031g0023 992 SMART LRR_typ_2 527 550 IPR003591 -
Mibi2000031g0023 992 Pfam Protein kinase domain 709 916 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi2000031g0023 992 ProSiteProfiles Protein kinase domain profile. 707 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi2000031g0023 32 989 Receptor kinase-like Gene Family AT5G01890 61.054 0.0 1125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Mibi2000031g0023 Pkinase 3.2e-41 CL0016