Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi2000031g0018 ATGGTGCTACAGTCCTACGCACTTACCATACTCCTGATTCTCTCTACCCATACTTTGGCTGATCTTAACTCAGAGAAGCAGGCCCTCCTTGACTTTGCTGCTGCATTTCATCACAACGCCCAAAGAATCAATTGGAATGCTGATACCCCAATGTGCACTTCTTGGGTGGGAATCACTTGCACCCCAAATGCCTCCCATGTGTTTGCTCTGCGCCTTCCCGGTGTTGGCCTGCGTGGCTCTCTCCCTGCCAATACCATCAGTAAGCTTCATGGCCTCATCATTCTCAGCCTTCGTTCCAACACCCTCAGTGGACATCTTCCTAATGACATACTCTCCCATCCTTCCCTCCGCTTTATATATCTTCAACACAACAACTTCTCAGGCGTCATCCCTCACTCTCTCTCTCTCTCTCACTCTCACCACCTTCTCTTTCTTGATCTCTCCTACAACTCCTTCACAGGACACATTCCACCCTTCATTCAGAACTTGCCATATCTAACTGGACTAAAACTCCAGAATAACTCTCTCAGCGGGCCAATCCCCGATTTATACCTCTCAAAGCTCAAGACTTTGGATTTGAGCTACAACAACTTCAGTGGCTCCATTCCTTCAGCCCTCCACAAATTCCCTCCCTCCTCATTCCGAGGGAATCTCAAGTTATGTGGACCGCCTGTAGACCAATGTTCTTCGGCTTCCCCATCTTTCGTGCCGTCTCCACCAACGGTCTCCTCAAAACCAAGTGATCTCTCCAACAGGAAGCTCAATACAGGTGCTATAATTGCAATTTCTTTCATTGGCTTTACACTGCTGTTTCTTCCGCTTACGATTGTAGTGTTGCGCTGTCTCAAGAAAAGAGATGGTGGACAAAATGTAACACTTAGAGAGAAGGAAGACAGACTTAAAGAGGACTTTGGGAGTGGAGTGCAAGAACCAGAGAAAAACAAGCTAATATCTCTTGAAGGTTGTTCTTATAGTTTTGATCTTGAGGACCTATTGAGAGCTTCTGCTGAAGTACTTGGGAAGGGATGCTGCGGGACTACTTACAAAGCCATCTTGGAGGAGGGTACGGCAGTGGTTGTGAAGAGGTTGAAAGAAGTAGTAGTGGGGAGAAAAGAATTTGAACAACAAATGGAGACTGTTCAAAGGGTAGGTCATCACCCAAATGTTATTCCTGTTCGTGCTTACTACTACTCCAAGGACGAAAAACTGCTGGTTTATGATCATATAGCACTTGGAAGCCTTTCCAGGCTATTGCATGGAACTAAGGGAGCTGGACGAACTCCATTAGACTGGGAATCCAGACTGAAGATCTCACTTGGAGCTGCTAGGGGTATTGCACATATCCACACAGCTAGCGGACGGAAATTTGTCCATGGCAATATTAAATCATCTAATGTGCTTGTCACAGTAGATGTCAAAGGCTGCATATCAGATTTTGGCTTATCTCCTCTAATCAGTTTTTGTGTCCCATCCAGAAGTCCCGGGTACCAAGCACCTGAGGTTATTGAAACCAGAAAATCCTCCCAGAAGTGTGATGTACATAGCTTTGGCGTTATCCTTCTTGAGATGCTGACAGGCAAAACACCAGTTCAGTATTCAGGGCATGATGAAGTGGTAGATCTTCCAAAGTGGGTTCAGTCTGTTGTTAGGGAGGAATGGACTGCAGAAGTTTTTGATGTAGAGCTGATGAGGTACCCAAATATTGAAGAAGAACTGGTGCAGATGCTGCAGTTAGCAATGGCGTGTGTGGCAAGGGAGCCTGACACCAGACCTTCAATGGAGGAAGTCGTTAAAATACTTGAAGAGATCAGAGCATCCAATTCTGAATTTACGAATTTAATTATGACTTGA 1851 0.456 MVLQSYALTILLILSTHTLADLNSEKQALLDFAAAFHHNAQRINWNADTPMCTSWVGITCTPNASHVFALRLPGVGLRGSLPANTISKLHGLIILSLRSNTLSGHLPNDILSHPSLRFIYLQHNNFSGVIPHSLSLSHSHHLLFLDLSYNSFTGHIPPFIQNLPYLTGLKLQNNSLSGPIPDLYLSKLKTLDLSYNNFSGSIPSALHKFPPSSFRGNLKLCGPPVDQCSSASPSFVPSPPTVSSKPSDLSNRKLNTGAIIAISFIGFTLLFLPLTIVVLRCLKKRDGGQNVTLREKEDRLKEDFGSGVQEPEKNKLISLEGCSYSFDLEDLLRASAEVLGKGCCGTTYKAILEEGTAVVVKRLKEVVVGRKEFEQQMETVQRVGHHPNVIPVRAYYYSKDEKLLVYDHIALGSLSRLLHGTKGAGRTPLDWESRLKISLGAARGIAHIHTASGRKFVHGNIKSSNVLVTVDVKGCISDFGLSPLISFCVPSRSPGYQAPEVIETRKSSQKCDVHSFGVILLEMLTGKTPVQYSGHDEVVDLPKWVQSVVREEWTAEVFDVELMRYPNIEEELVQMLQLAMACVAREPDTRPSMEEVVKILEEIRASNSEFTNLIMT 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi2000031g0018 616 Gene3D Ribonuclease Inhibitor 138 230 IPR032675 -
Mibi2000031g0018 616 Gene3D Phosphorylase Kinase; domain 1 302 408 - -
Mibi2000031g0018 616 FunFam pollen receptor-like kinase 1 301 408 - -
Mibi2000031g0018 616 Pfam Leucine Rich Repeat 187 209 IPR001611 GO:0005515
Mibi2000031g0018 616 PANTHER OS05G0588300 PROTEIN 9 605 - -
Mibi2000031g0018 616 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 409 612 - -
Mibi2000031g0018 616 SUPERFAMILY L domain-like 43 209 - -
Mibi2000031g0018 616 Gene3D Ribonuclease Inhibitor 23 137 IPR032675 -
Mibi2000031g0018 616 SUPERFAMILY Protein kinase-like (PK-like) 337 601 IPR011009 -
Mibi2000031g0018 616 ProSiteProfiles Protein kinase domain profile. 333 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi2000031g0018 616 FunFam Probable inactive receptor kinase RLK902 22 184 - -
Mibi2000031g0018 616 Gene3D Transferase(Phosphotransferase) domain 1 410 613 - -
Mibi2000031g0018 616 Pfam Protein kinase domain 336 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi2000031g0018 616 Pfam Leucine rich repeat N-terminal domain 23 60 IPR013210 -
Mibi2000031g0018 616 CDD STKc_IRAK 339 603 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi2000031g0018 8 611 Receptor kinase-like Gene Family AT5G58300 58.660 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mibi2000031g0018 Pkinase 5.6e-33 CL0016