Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1770 ATGGCTTCTCTTCTCCCATTTCAGGATCTCAATTGCTTCCCTAACCCTCACACTGCCATCAGTAACCCCACTGTGGGACCCACTTCCTCCCCCAAAACCTTCATCCCAACAACATTGGTTCCCAAGCCTGAGCCTTTGGACGATCTTGACAAAATCCCACAAACCATCATTTCAACTCCTAACCCTAATAATAACGATGCAAAATCCTCTAATCCTCCTCCTCCTCCTGCTGAAATCCCACAAGGCGTCCCGATTGAAGACCACGTGCTTTCAGAGTACAATCGGATCAATCAAATGTTTTTGACAGCGTTCCCTGACAATGTAGTACTTCAATCCGTAGATGCCGACGTGTCAAACGCTGATTCGAGGGCGATTGTGGCATTACCAAAGGACAACAACAACGCGCAGGTTTCTTCTGTGGTCGTTGCCACACGGAAGCGAACCTCCCAGCGCGTGAAGGAGCTTGTAAGGTTTGACGGTGTTACGAATGAGTACGGAAGGCTAAATCGTGCCACAATTAGAAGGACAAGGATGGTGTATGATTCGTTGCGTGTATTGACTTCAATAGAGGAGAAGAAAAGTGGTGGTGATGATTCAGTTAAACGTAAGAGGGTTCGTGGTGATACGCAAGCTGCTACTACTTTGAGAAGCCATGGGATGTGGCTTAATAGAGATAAGAGGATAGTGGGTGCTATTCCAGGTATTAATGTTGGTGATTTGTTCCTTTATAGGATGGAATTGTTAGTGGTTGGCTTGCATTGTCAAACTCAAGCTGGTATTGATTATCTTCCTGCGAGTATGAGTCCAAATAGGGAGCCAATTGCAACTAGTGTTATTGTATCAGGCGGGTATGAGGATGATATTGATGATGGGGATGTTATAATATATACAGGACATGGGGGGCAGGATAATAAGCATTCTAAGCAAGTTGCTCATCAGAAGTTGGAACATGGGAATCTTGCATTGGAAAGAAGCATGCGGTATGGGGTTGAAGTGAGGGTTATTCGTGGGATGAAATATGAGGGGAGTGCTTCAACCTCAAACAAGGTTTATGTGTATGATGGGTTGTACCGGATAGCTGATTGCTGGTTTGAATTGGGTAAGTCTGGATTTGGGGTTTTTAAGTATAAACTTGTGAGGATTGATGGGCAAGAAAGATTGGGTAGTGCAAATCTTAAACATGCTCGGCTTCTAAAGATTGATCCACTTGTATCTGATTCTATGTGTTGCCTTAGTCTTGATATTTCGCTCAACAAGGAGAGTGTTCCTGTTCGTCTCTTCAATGACATTGATGCTGATGATAGTCCTCTTCGTTTTGAGTATCTTCCGAGGTCTAGTTTTCCTCTTTTCGTGTTCCATCAGAGTGGAAGTGCTACTGGCTGTGAGTGTGTGCAAGGTTGTGCTGATGACTGTTTTTGTGCTTTGAAAAATGGAGGTGGACATCCTTATAATAGAAGTGGGATTCTGTTGAGAGGGAAGCCAGTAATTTTTGAATGTGGTCAATTCTGCAGTTGTCCTCCGAATTGTCAAAATCGTGTGACACAAAAAGGGTTGAAAGTTAGATTGGAAGTTTTTAGATCTAGGGAATCAGGTTGGGGAGTTAGGTCCCTGGATGTTATTCATGCTGGTTCTTTTATCTGTGAATATACAGGGGTCGTAGTGACAAAGGGGCAAGCACAGATTTTGACTATGAACGGTGATGCAATGGTGTATCCTAGTCAGTTTCCTGATAGGTGGGCAGAATGGGGGGATTTATCACAAATATCCTCTGATTATGTGCGTCCATCGTATCCATCAATTCCTCCATTAGATTTTGCCTTGGATGTGTCAACAATGAGGAACGTTGCTTGCTATATCAGGCACAGTTTAACTCCAAATGTGTTTGTTCAGTTTGTTCTCTATGATCACAATAACTTGATGTTTCCTCACCTTATGCTTTTTGCAATGGAGACCATCCCTCCCTTGAGGGAGCTCACTTTGGATTATGGAGTGGTTGATGATTGTACAGCCAAGCTCTTAATATGTAACTGA 2031 0.4343 MASLLPFQDLNCFPNPHTAISNPTVGPTSSPKTFIPTTLVPKPEPLDDLDKIPQTIISTPNPNNNDAKSSNPPPPPAEIPQGVPIEDHVLSEYNRINQMFLTAFPDNVVLQSVDADVSNADSRAIVALPKDNNNAQVSSVVVATRKRTSQRVKELVRFDGVTNEYGRLNRATIRRTRMVYDSLRVLTSIEEKKSGGDDSVKRKRVRGDTQAATTLRSHGMWLNRDKRIVGAIPGINVGDLFLYRMELLVVGLHCQTQAGIDYLPASMSPNREPIATSVIVSGGYEDDIDDGDVIIYTGHGGQDNKHSKQVAHQKLEHGNLALERSMRYGVEVRVIRGMKYEGSASTSNKVYVYDGLYRIADCWFELGKSGFGVFKYKLVRIDGQERLGSANLKHARLLKIDPLVSDSMCCLSLDISLNKESVPVRLFNDIDADDSPLRFEYLPRSSFPLFVFHQSGSATGCECVQGCADDCFCALKNGGGHPYNRSGILLRGKPVIFECGQFCSCPPNCQNRVTQKGLKVRLEVFRSRESGWGVRSLDVIHAGSFICEYTGVVVTKGQAQILTMNGDAMVYPSQFPDRWAEWGDLSQISSDYVRPSYPSIPPLDFALDVSTMRNVACYIRHSLTPNVFVQFVLYDHNNLMFPHLMLFAMETIPPLRELTLDYGVVDDCTAKLLICN 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1770 676 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 81 676 IPR025794 GO:0016571
Mibi13g1770 676 ProSiteProfiles YDG domain profile. 230 380 IPR003105 -
Mibi13g1770 676 Gene3D SET domain 393 676 IPR046341 -
Mibi13g1770 676 ProSiteProfiles SET domain profile. 520 663 IPR001214 GO:0005515
Mibi13g1770 676 SUPERFAMILY SET domain 407 664 IPR046341 -
Mibi13g1770 676 SMART G9a_1 225 384 IPR003105 -
Mibi13g1770 676 MobiDBLite consensus disorder prediction 38 82 - -
Mibi13g1770 676 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 212 396 - -
Mibi13g1770 676 Pfam SET domain 531 663 IPR001214 GO:0005515
Mibi13g1770 676 Gene3D - 224 392 IPR036987 -
Mibi13g1770 676 ProSiteProfiles Pre-SET domain profile. 459 517 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mibi13g1770 676 Pfam SAD/SRA domain 229 384 IPR003105 -
Mibi13g1770 676 Pfam Pre-SET motif 416 512 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mibi13g1770 676 SMART set_7 520 669 IPR001214 GO:0005515
Mibi13g1770 676 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 61 664 - -
Mibi13g1770 676 MobiDBLite consensus disorder prediction 67 81 - -
Mibi13g1770 676 SMART preset_2 412 504 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mibi13g1770 676 SUPERFAMILY PUA domain-like 211 389 IPR015947 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1770 Mibi-ChrMibi13 33115773 33117803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1770 132 664 Su(var)3-9 homologs AT5G04940 39.817 4.32e-110 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mibi13g1770 SAD_SRA 2.8e-50 CL0178