Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1766 ATGGGTTGTTGGAGTATAATTGAAGAAGAAACTTGTTGGAGAAAGGGGCCTTGGACTGCTGAAGAAGACAGACTTCTGATTGAGTATATCAGAGTGCATGGAGAAGGGAGATGGAACTCTGTTTCAAGACTTGCAGGACTGAAAAGAAATGGAAAGAGTTGCAGATTGAGGTGGGTGAATTATCTGAGACCGGACCTTAAGAGAGGCCAGATAACACCCCAAGAAGAGAGCATAATCATAGAACTTCATGCTAGGTGGGGAAACAGATGGTCAACAATTGCAAGGAGCTTGCCAGGTAGAACAGACAACGAGATAAAGAACTATTGGAGGACTCATTTCAAGAAGGCGGCAAAGAAATCTACTGATACTGCAGAAAAGGCAAAAAATTGCCTTTTGAGAAGACAACAATTTCAACAAGAAGAAGGTAAGCAGCAACATCATCAGCAACAATTACAGTTGGACATGAAAGGTATCATGGCTTTACTTGATGACAATGACAATGATTACAAAGTGCCTCCTACTATATGTTCAATGGCAAACTTCCATCCAAACACCTCAGAAGAACAAAGCTGCTTCTACTCTATGATCACTAATAATAATAATAATTCCTCTGCATCAGAAGCAATATATGAAGAGATTTTCTGGGATAGCCTTTGGAATATGGATGATTTTCAGGGGAATTTCAATGCAACCAATACAACAAGCAAACCCAATCTGCAGGCGGTTTCCTAA 732 0.403 MGCWSIIEEETCWRKGPWTAEEDRLLIEYIRVHGEGRWNSVSRLAGLKRNGKSCRLRWVNYLRPDLKRGQITPQEESIIIELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKAAKKSTDTAEKAKNCLLRRQQFQQEEGKQQHHQQQLQLDMKGIMALLDDNDNDYKVPPTICSMANFHPNTSEEQSCFYSMITNNNNNSSASEAIYEEIFWDSLWNMDDFQGNFNATNTTSKPNLQAVS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1766 243 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Mibi13g1766 243 Gene3D - 15 67 - -
Mibi13g1766 243 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Mibi13g1766 243 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Mibi13g1766 243 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 62 IPR017930 -
Mibi13g1766 243 CDD SANT 72 113 IPR001005 -
Mibi13g1766 243 SUPERFAMILY Homeodomain-like 14 109 IPR009057 -
Mibi13g1766 243 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 12 220 IPR044676 GO:0003700|GO:0006355|GO:0043565
Mibi13g1766 243 Gene3D - 72 153 - -
Mibi13g1766 243 SMART sant 14 64 IPR001005 -
Mibi13g1766 243 SMART sant 67 115 IPR001005 -
Mibi13g1766 243 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Mibi13g1766 243 ProSiteProfiles Myb-like domain profile. 14 62 IPR001005 -
Mibi13g1766 243 CDD SANT 17 62 IPR001005 -
Mibi13g1766 243 FunFam Myb transcription factor 15 67 - -
Mibi13g1766 243 FunFam MYB-related transcription factor 72 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1766 Mibi-ChrMibi13 32908676 32909954 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1766 10 227 MYB Transcription Factor Family AT4G13480 57.627 5.92e-83 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi13g1766 Myb_DNA-binding 2.4e-15 CL0123