Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1760 ATGTCATCCAGCCACTTCTCAATCCCTAGTTATGGTGTTAATCCAGTGATAAATATCAGTGCAAGTCAACTACGTGAAAGCCATCAGATGGAGACTGAGCGAAGAGGATCATATGCCCTACCTCAAATGGATTTTGGACAATTAGTCCCAATTCCTCCAACTTTTCCCCAAGGTATAATTCTTGGAGATCATCTATTCTCAACAAGAGAGTTAAGAATTCGTCTTTTTGGTTACAACATTACTAGTAGTAATAACACAAGACTAAGTGTTAATGCCATGAATACTAGTACGAACTTGGAAGATGTTGGTGTGAGAGAAGTCATTAATGGTGACAAATTTGATGGGCAAACACACAGTATTACCAAGCAAAAGTATGGCCCATATACGTGCCCCAAATGCAACAGAGTATTTCCAACATCACAACACTTTGCAGCGCATGTGAGAGTCCATTATTTGAGTGAAACAGAGGATGCAAGGAAAAATCGTCTCCTCGCAAAGATAAGTAAAAAAAGCAAAAACCTTCATCTTCGTGAATCAATGGAAGGGATAACGATTGTCTCTAATCCTCTAAGGCCAATAAAAAACAATACTGTTGCCCAACAAAGAACTGAAGGATCTATTAAGGTTGAAGTAAAAGAGTTCGCAAAAGACCATTTTCCAGGTGCTCCTCCAAGATTTGAGGGCTACCAATATGGCCCCTCATCATTTGGTGTAAAAATCAACGGCCCAGATGTTCCCCTAGGGTTTGAGGGCTATCACTATGGCTCTTCATCATCTGGTGTAAAAATCAACGGTCCAGATGTTCCTCCAGGGTATGAGAACTGTTACTTTGGCCCATCATCATCTGGTGTAAAAATCAATGGTCCAGATGTTCCTCCGAGGTTTGAGAACTGTTACTTTGGCCCATCATCTTCTGGTGTAAAAATCAATGGTCCAGATGTTCCTTCGGGATATGAGAACTGTTACTTTGGCCCATCATCTTCTGGTGTAAAAATCAATGGTCCAGCTGTTCCTCCGAGGTTTGAGAACTGTTACTTTGGCCCATCATCTTCTGGTGTAAAAATCAATGGTCCAGATGTTCCTTCGGGATATGAGAACTGTTACTTTGGCCCATCATCATCTGGTGTAAAAATCAATGGTCCAGATGTTCCTCCGAGGTTTGAGAACTGTTACTTTGGCCCATCATCTTCTGGTGTAAAAATCAATGGTCCAGATGTTCCTTCGGGATATGAGAACTGTTACTTTGGCCCATCATCATCTGGTGTAAAAATCAATGGTCCAGATGTTCCTCCGAGGTTTGAGAACTGTTACTTTGGCCCATCATCTTCTGGTGTAAAAATCAATGGTCCAGATGTTCCTTCGGGATATGAGAACTGTTACTTTGGCCCATCATCTTCTGGTGTAAAAATCAATGGTCCAGCTGTTCCTCTAGGGTATGAGAACTGTTACTTTGGCCCATCATCATCTGGTGTTAGAATCAAGACTGAACCTGGCCAAATTTAA 1503 0.4152 MSSSHFSIPSYGVNPVINISASQLRESHQMETERRGSYALPQMDFGQLVPIPPTFPQGIILGDHLFSTRELRIRLFGYNITSSNNTRLSVNAMNTSTNLEDVGVREVINGDKFDGQTHSITKQKYGPYTCPKCNRVFPTSQHFAAHVRVHYLSETEDARKNRLLAKISKKSKNLHLRESMEGITIVSNPLRPIKNNTVAQQRTEGSIKVEVKEFAKDHFPGAPPRFEGYQYGPSSFGVKINGPDVPLGFEGYHYGSSSSGVKINGPDVPPGYENCYFGPSSSGVKINGPDVPPRFENCYFGPSSSGVKINGPDVPSGYENCYFGPSSSGVKINGPAVPPRFENCYFGPSSSGVKINGPDVPSGYENCYFGPSSSGVKINGPDVPPRFENCYFGPSSSGVKINGPDVPSGYENCYFGPSSSGVKINGPDVPPRFENCYFGPSSSGVKINGPDVPSGYENCYFGPSSSGVKINGPAVPLGYENCYFGPSSSGVRIKTEPGQI 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1760 500 SUPERFAMILY Pectin lyase-like 319 424 IPR011050 -
Mibi13g1760 500 ProSitePatterns Zinc finger C2H2 type domain signature. 130 150 IPR013087 -
Mibi13g1760 500 SMART c2h2final6 128 150 IPR013087 -
Mibi13g1760 500 ProSiteProfiles Zinc finger C2H2 type domain profile. 128 155 IPR013087 -
Mibi13g1760 500 SUPERFAMILY beta-beta-alpha zinc fingers 116 150 IPR036236 -
Mibi13g1760 500 Gene3D Classic Zinc Finger 112 182 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1760 106 170 C2H2 Transcription Factor Family AT2G15740 56.923 1.91e-16 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi13g1760 None None None