Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1743 ATGGAGTCCCTTGCTTTTGTGGATGACCTGCTGAATTTCTCATCTGATGTGGGCGATGAAGATGATGAGGAAGATAAACCCAGGAAAGCCTTGTCTTCTCTTAGCCTTAAGTGTAGTGGTCCAGCTTCATTAAATGCTTTGGACGCAGATGATCCAACCCATTCCTTTTCTGAGTTTGCAGAAGAAGAGCTTGAATGGATATCCAACAAAGATGCTTTCCCAGCTGTTGAAACATATGTTGACATGCTCTCTACTCAACCGAACTTGTCAAAGCCTCAAACTCCAGTCTCAACACTTGAATACAGTGCTAGTAGTATCAACAGTAATAGCAGTGCTAACAATGTTACCCTCTTAGATGGCTTTAATCATGTAAAGGTTCCCGTCCGAGCACGAAGCAAGCGTCATAATAGGAAAACCTGTGGTGTTGCTGACATATCCAGTCGGCAGTTTTGGTGGAACCAGCCAAGTAACACAATTACCAAACCAGAAGTGACGATAATGAAATGCCAACACTGTGGAGCAGAAAAAACTCCACAGTGGCGTGCAGGACCCCTTGGGCCAAAAACACTTTGCAATGCATGTGGGGTTAGGTTTAAGTCAGGACGACTTTTGCCGGAATACCGCCCTGCAAGTAGCCCCACGTTTTGTAGTGACTTGCATTCAAATTCCCACCGGAAGGTAGTCCAGATGAGAAAGCAAAAACAAATGGGAGGCCAGGGATGA 723 0.4523 MESLAFVDDLLNFSSDVGDEDDEEDKPRKALSSLSLKCSGPASLNALDADDPTHSFSEFAEEELEWISNKDAFPAVETYVDMLSTQPNLSKPQTPVSTLEYSASSINSNSSANNVTLLDGFNHVKVPVRARSKRHNRKTCGVADISSRQFWWNQPSNTITKPEVTIMKCQHCGAEKTPQWRAGPLGPKTLCNACGVRFKSGRLLPEYRPASSPTFCSDLHSNSHRKVVQMRKQKQMGGQG 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1743 240 ProSitePatterns GATA-type zinc finger domain. 169 194 IPR000679 GO:0006355|GO:0043565
Mibi13g1743 240 Gene3D - 165 237 IPR013088 GO:0006355|GO:0008270
Mibi13g1743 240 Pfam GATA zinc finger 169 203 IPR000679 GO:0006355|GO:0043565
Mibi13g1743 240 PANTHER GATA TRANSCRIPTION FACTOR 8 235 - -
Mibi13g1743 240 MobiDBLite consensus disorder prediction 14 33 - -
Mibi13g1743 240 FunFam GATA transcription factor 159 239 - -
Mibi13g1743 240 ProSiteProfiles GATA-type zinc finger domain profile. 167 199 IPR000679 GO:0006355|GO:0043565
Mibi13g1743 240 CDD ZnF_GATA 168 215 IPR000679 GO:0006355|GO:0043565
Mibi13g1743 240 SMART GATA_3 163 213 IPR000679 GO:0006355|GO:0043565
Mibi13g1743 240 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 168 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1743 Mibi-ChrMibi13 32372337 32378893 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1743 1 237 C2C2-Gata Transcription Factor Family AT3G24050 42.164 1.33e-49 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mibi13g1743 GATA 1e-16 CL0167