Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1730 ATGTTTTCCCATCATCATCACTTTCTTGCATGCTTATTGTTTCTGACATGTGTGGGCTTATTGGGATCAGAACTCTCTAGTGCACAATATTATCAAAAAATCGGAGAGAAACTGGTCCCTTACCGGAAGATCACCGTCGACGCCGCCGGTACCGGCAACTTCACCACCATCCAAGAAGCCATAAACTCAATCCCTTCCAACAACAACTATTGGGTTTCCATCAATATAAAGCCAGGCATATATAGGGAAAAAGTGAGGATTCCTGATGACAAGCCTTATATAGTATTGAAAGGATCAGGGAAGAAAAAAACTATTGTTGTTTGGGATGATCATGAAACAATTGCACAGAGTCCTACGTTTACGTTGCTGGCTGACAATATTGTCGTCAAATGTTTGAGCTTTCGGAATTCATACAATAATCCAATTAACGGCAAGCGGAGGTTGCCAGCGGTGGCGGCAATGGTAGCCGGTGACAAAGCTTTCTTCTACCGTGTAGGATTTTTCGGTTTACAAGATACATTGTGGGATGATCAAGGGAGGCATTACTACAAACTTTGTACCATTCAAGGTGCTGTTGATTTTATTTTTGGTGCAGGCCAATCTTTATTTGAGAGATGTTCTATATCAGTGATTGCTGGAGCCCTGGACGGGCTTCCAGGGTTTATAACAGCACAAGGAAGAACAAATCCGAATGATGCAAATGGATTTGTGTTTAAAGACTGTCATGTGTTTGGGAATGGAACAACATATTTGGGAAGGCCTTGGAGAGGCTATTCAAGAGTTCTCTTCTACAAAACCAATATGACTCAAGTTGTTGAACCAGAGGGCTGGCAGCCTTGGAATTTCAATACTAATGTGAATCACGTAACATTTGCAGAGTATGGGTGTTTTGGGCCTGGATCTAACACATCCCAAAGAGTGAGTTGGTCCAAGAAGAATCTTGACTTAACATATTTGGATCAATTGGCTAGTATGAGCTTCGTTGATTCTGAAGGGTGGCTTCAGAATCAACTTTTCTGA 1020 0.4186 MFSHHHHFLACLLFLTCVGLLGSELSSAQYYQKIGEKLVPYRKITVDAAGTGNFTTIQEAINSIPSNNNYWVSINIKPGIYREKVRIPDDKPYIVLKGSGKKKTIVVWDDHETIAQSPTFTLLADNIVVKCLSFRNSYNNPINGKRRLPAVAAMVAGDKAFFYRVGFFGLQDTLWDDQGRHYYKLCTIQGAVDFIFGAGQSLFERCSISVIAGALDGLPGFITAQGRTNPNDANGFVFKDCHVFGNGTTYLGRPWRGYSRVLFYKTNMTQVVEPEGWQPWNFNTNVNHVTFAEYGCFGPGSNTSQRVSWSKKNLDLTYLDQLASMSFVDSEGWLQNQLF 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1730 339 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 39 335 - -
Mibi13g1730 339 FunFam Pectinesterase 39 338 - -
Mibi13g1730 339 ProSitePatterns Pectinesterase signature 2. 188 197 IPR033131 -
Mibi13g1730 339 Pfam Pectinesterase 44 318 IPR000070 GO:0030599|GO:0042545
Mibi13g1730 339 Gene3D - 40 339 IPR012334 -
Mibi13g1730 339 SUPERFAMILY Pectin lyase-like 41 335 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1730 Mibi-ChrMibi13 31372615 31377249 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1730 5 281 Carbohydrate Esterase AT2G19150 42.857 8.68e-73 225