LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi13g1703	ATGGCATCTCCTGGTGGTAGTTGTTCTACGGGTTCCGATGTGGACCAGAAAAAGAGGAAGAGGATGGAGTCCAATCGTGAGTCGGCACGGCGATCGAGGATGAGGAAACAACAGCATCTGGATGAATTGATGAGGCAAGTGGGAGAGCTGAAAAAGGAGAATGAAGAGATAATGAACAAGTTGGGCACCACCAACCAACTCTATGTGAACATGGAGGCACAAAACGCTGTGTTGAGGACTCAAATGGCTGAGTTGACCAACAGATTGGAATCTCTCAATGACATCATAAGCTACATAAACAACTCCAATTATAATAATAATCCTCTCTTTGGTGGTGGTGAAGATGAGATTAATTACAATAATGGCACTGAAATGATCTCAGATTGTGGCTTCTTCAACCCTTGGATTAATCAACCCATCATGGCTTCTGGCAATAATATCATGTATTGA	450	0.4289	MASPGGSCSTGSDVDQKKRKRMESNRESARRSRMRKQQHLDELMRQVGELKKENEEIMNKLGTTNQLYVNMEAQNAVLRTQMAELTNRLESLNDIISYINNSNYNNNPLFGGGEDEINYNNGTEMISDCGFFNPWINQPIMASGNNIMY	149

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi13g1703	149	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	15	78	IPR004827	GO:0003700\|GO:0006355
	Mibi13g1703	149	FunFam	BZIP transcription factor	15	66	-	-
	Mibi13g1703	149	Pfam	bZIP transcription factor	17	75	IPR004827	GO:0003700\|GO:0006355
	Mibi13g1703	149	Coils	Coil	26	60	-	-
	Mibi13g1703	149	Gene3D	-	15	70	-	-
	Mibi13g1703	149	SMART	brlzneu	13	77	IPR004827	GO:0003700\|GO:0006355
	Mibi13g1703	149	MobiDBLite	consensus disorder prediction	1	38	-	-
	Mibi13g1703	149	CDD	bZIP_plant_GBF1	18	68	IPR045314	GO:0003700\|GO:0006355
	Mibi13g1703	149	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	20	35	IPR004827	GO:0003700\|GO:0006355
	Mibi13g1703	149	Coils	Coil	68	95	-	-
	Mibi13g1703	149	PANTHER	BZIP TRANSCRIPTION FACTOR 44	6	144	-	-
	Mibi13g1703	149	SUPERFAMILY	Leucine zipper domain	17	71	IPR046347	GO:0003700\|GO:0006355
	Mibi13g1703	149	MobiDBLite	consensus disorder prediction	13	38	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi13g1703	Mibi-ChrMibi13	30699489	30699938	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi13g1703	12	149	bZIP Transcription Factor Family	AT4G34590	47.260	1.43e-35	119

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Mibi13g1703		bZIP_1	2.5e-12	CL0018