Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1687 ATGGCCTTCAATGGATTATCAACAATCTCAGGAACTGATTGTCGCTTCTTCAACAATCTCACAACCCCACCAATTTCCTCCATCAATTCCTTGAAATTTTCCTCAGTTCGACTTTCACCTCGTTCTGTTTCTTTCAAATCGAGAGCTCTGTCTTACACTGAGCCCTCTTTTTCGTCGTCATCATCGTCGTCTTTGTTTCCCTCTGAATTAAGCTTCTATGAGCTTCTGGGTATACCTGAAACTGGATCCCTACTTGACATTAAGCAAGCTTACAAGCAACTCGCCCGAAAGTACCATCCTGATGTGTCACCTCCGGGTCGCCTTGATGAGTTCACTCAGATGTTCATTCTTGTTCATGAAGCCTATGAAACTTTGTCTGATCCTGAAAGGAGAGCTAGATATGATAGATGCATTCACTTTCCCTGCTCTACTTGCCAATGCGACTATGACGATGAGATGGCTGAAATAAAAAAGGGATGGAGAGCTATTTGGGAGGCTCAGCTATCAAATCTGAAGAACAGAACTACTTACAAGTATGGCGATAGAAGTCAGTCATGGGCGTCCCAAGTCCGCCAGACGAGGAATGGAAATGAATTTTACAATTAG 606 0.434 MAFNGLSTISGTDCRFFNNLTTPPISSINSLKFSSVRLSPRSVSFKSRALSYTEPSFSSSSSSSLFPSELSFYELLGIPETGSLLDIKQAYKQLARKYHPDVSPPGRLDEFTQMFILVHEAYETLSDPERRARYDRCIHFPCSTCQCDYDDEMAEIKKGWRAIWEAQLSNLKNRTTYKYGDRSQSWASQVRQTRNGNEFYN 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1687 201 SUPERFAMILY Chaperone J-domain 69 141 IPR036869 -
Mibi13g1687 201 Pfam DnaJ domain 72 135 IPR001623 -
Mibi13g1687 201 ProSiteProfiles dnaJ domain profile. 71 138 IPR001623 -
Mibi13g1687 201 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 45 195 - -
Mibi13g1687 201 CDD DnaJ 72 127 IPR001623 -
Mibi13g1687 201 SMART dnaj_3 70 130 IPR001623 -
Mibi13g1687 201 PRINTS DnaJ domain signature 110 130 IPR001623 -
Mibi13g1687 201 PRINTS DnaJ domain signature 73 91 IPR001623 -
Mibi13g1687 201 PRINTS DnaJ domain signature 91 106 IPR001623 -
Mibi13g1687 201 Gene3D DnaJ domain 58 158 IPR036869 -
Mibi13g1687 201 ProSitePatterns Nt-dnaJ domain signature. 115 134 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1687 Mibi-ChrMibi13 29996383 29998368 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1687 73 135 C2H2 Transcription Factor Family AT1G74250 41.791 1.36e-06 46.2