Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1686 ATGGCCTTGAATGGATTATTAACAATCTCAGGAACCGATTCTCGCTTCTTCACCAACCTCACAACCCCACCAATTTCCTCCATCAATTCCTTGAAATTTTCCTCAGTTCGACTTCCTCCTCGTTCCGTTTCGTTCAAATCGAGAGCTGTGTCTTACACTGAGCCCTCTTTTTCGTCATCATCGTTGTCATCGTCTTTGTTTCCCTCTGAATTAAGCTTCTATGAGCTTCTGGGTATACCTGAAACTGGATCCCTACTTGACATTAAGCAAGCCTATAAGCAACTCGCCCGAAAGTACCATCCTGATGTGTCACCTCCGGGTCGGCTCGACGAGTTCACTCAGATGTTTATTCTTGTTCATGAAGCCTATGAGACTTTGTCTGATCCTGAAAGGAGAGCTAGATATGATAGATGCATTCACTTTCCCTGCTCTACTTGCCGATGCGACTATGACGATGAGATGGCTGAAATAAAAAAGGGATGGAGAGCTATTTGGGAGGCTCAGCTATCAAATCTGAAGAACAGAACTACTTACAAGTATGGCGATAGAAGTCAGTCATGGGCATCCCAAGTCCGCCAGACGAGGAATGGAAATGAATTTTACAATTAG 609 0.4433 MALNGLLTISGTDSRFFTNLTTPPISSINSLKFSSVRLPPRSVSFKSRAVSYTEPSFSSSSLSSSLFPSELSFYELLGIPETGSLLDIKQAYKQLARKYHPDVSPPGRLDEFTQMFILVHEAYETLSDPERRARYDRCIHFPCSTCRCDYDDEMAEIKKGWRAIWEAQLSNLKNRTTYKYGDRSQSWASQVRQTRNGNEFYN 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1686 202 CDD DnaJ 73 128 IPR001623 -
Mibi13g1686 202 SUPERFAMILY Chaperone J-domain 70 142 IPR036869 -
Mibi13g1686 202 Pfam DnaJ domain 73 136 IPR001623 -
Mibi13g1686 202 SMART dnaj_3 71 131 IPR001623 -
Mibi13g1686 202 ProSiteProfiles dnaJ domain profile. 72 139 IPR001623 -
Mibi13g1686 202 Gene3D DnaJ domain 58 158 IPR036869 -
Mibi13g1686 202 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 50 196 - -
Mibi13g1686 202 ProSitePatterns Nt-dnaJ domain signature. 116 135 IPR018253 -
Mibi13g1686 202 PRINTS DnaJ domain signature 74 92 IPR001623 -
Mibi13g1686 202 PRINTS DnaJ domain signature 92 107 IPR001623 -
Mibi13g1686 202 PRINTS DnaJ domain signature 111 131 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1686 Mibi-ChrMibi13 29894766 29896985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1686 62 136 C2H2 Transcription Factor Family AT1G74250 38.462 2.84e-06 45.4