Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1672 ATGCGTTTGCTGTCATTGAAGGAGAAAGGAATTGCTGCGGAATTTCTCTCCTCAACCCAAACAGCTGATGCAAGAAATAAGATTTATGAGGACATTGATTCTGCAAAGTCTTCTATAAGGCTGCTATATGTCACTCCAGAATTGATAGCAACGCAGGGTTTCATGTCAAAGCTGAAAAAAATATATGCTAAAGGGTTGTTGAATCTCATTGCCATAGATGAGGCACATTGCATCTCAACTTGGGGCCATGATTTCAGGCCTAGCTACCGTAAGCTTTCATCCTTGAGAGACCACTTTTTGGATGTGCCAGTGTTAGCTCTGACTGCTACAGCTGCTCCTAAGGTACAGAAGGATGTGGTAAAATCATTGAACATGCAAAATCCATTAATTCTCAAGTCATCTTTTAATCGTCCAAATATATACTATGAAGTTCGATACAAAGATCTTTTGGAAGATGCTTATACTGATCTGTCCAATATGCTAAAATCTAAGGGTGATGTCTGTGCAATTGTTTATTGCCTTGAGCGTTCAGCATGTGATGACCTGGCAGCTCATCTATTGCAAAATGGCATTTCCTGTGCTGCCTATCATGCAGGGTTGAATAATAAATTGCGGACTTCTGTATTGGATAGTTGGATTTCATCTAAGATACAAGTTGTTGTTGCCACTGTTGCTTTTGGGTTAGGTATTGACAGAAAGGATGTCAGACTTGTGTGTCACTTTAATATTCCGAAGTCAATGGAAGCATTCTATCAGGAGTCAGGTAGGGCAGGTCGTGATCAGTTGCCCTCTACAAGTTTGTTGTACTATGGAGTAGATGATCACAAAAGAATGGAATTTATACTAAGCAAATCTGCAAGCAATAAATCACAATCATCAAGCTCTCAAAAAGAATCGTCTGAAAAGTCACTAGCTGACTTTAATCAGATGGTTGAATACTGTGAAGGATCTGGGTGCCGAAGGAAAAAGATTCTTCAGAGTTTTGGGGAGCAGGTGACTGCGTCCCTATGTGGAAAATCATGTGATGCCTGCAGACACCCAAACTTAATCGCTAGATGTTTGGAGGACATAATAACTGCTCGTTCTATACTCCAGAGAAATAATTCCTCTCGAATCTTTATCACCAGTTCAACAAGTGGAGTTGATGAACAAGTATCTGAGTTCTGGAATCGCGATGAAGAAGTGAGTGGATCAGATGAGGACATATCTGATTCAGATGATGGTACTGAGATTGTCAACAACCTAATTAGATCAAATTCCAAATCCAGATTGGGAGTGAATGAAAAAATATCAATGTTACAGCATGCTGAGGAAAAGTTCTACCGAAACAATAATGCTGATAAACAGAGAAACAAGTTTGACAAGAGTGCCATATCTGACTCAATGAGAGGAGCTAGCAAGGAAAAACTGCAAAATTCTCTTAAGCAGGCCCAGCAACGGCTCCACAACTTGAAGATTGATGTGGAATCATCGGCATCTTTGCTAGAAGATGAGTGCTACAAGAAATATGGGAAGATTGGCAAATCATTCTATTATTCACAGGTTGCAAGTACTGTTAGGTGGTTGTCAACTACTAATTCAACCGATTTGATGAATCGTCTTCCAGGGACTGATGCTTCCTCATCAATGATTGTATCTCCTGAAGCTGAAAATCTCCGTACAACGCTGCCTTTATCAGATCCTTCTGTGAAAGGAGGGACTGACAATGAACCTGATGCCATTGCTGAGTTAGAAACCTTTCCACTCGCTTCTCCAATAGAAGGTTCATCCATGAAGACAAAGTTGCCGCCAATTCCATCCTTCTCAGAGTTTGTTGACAGTAAAAAGGCAAAAGGTGATCAAAGAAAAACCAAACATGAACACTCACCAAGAGTAGAGAAGAGGTCCAGGCTCTCATAA 1899 0.4049 MRLLSLKEKGIAAEFLSSTQTADARNKIYEDIDSAKSSIRLLYVTPELIATQGFMSKLKKIYAKGLLNLIAIDEAHCISTWGHDFRPSYRKLSSLRDHFLDVPVLALTATAAPKVQKDVVKSLNMQNPLILKSSFNRPNIYYEVRYKDLLEDAYTDLSNMLKSKGDVCAIVYCLERSACDDLAAHLLQNGISCAAYHAGLNNKLRTSVLDSWISSKIQVVVATVAFGLGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSTSLLYYGVDDHKRMEFILSKSASNKSQSSSSQKESSEKSLADFNQMVEYCEGSGCRRKKILQSFGEQVTASLCGKSCDACRHPNLIARCLEDIITARSILQRNNSSRIFITSSTSGVDEQVSEFWNRDEEVSGSDEDISDSDDGTEIVNNLIRSNSKSRLGVNEKISMLQHAEEKFYRNNNADKQRNKFDKSAISDSMRGASKEKLQNSLKQAQQRLHNLKIDVESSASLLEDECYKKYGKIGKSFYYSQVASTVRWLSTTNSTDLMNRLPGTDASSSMIVSPEAENLRTTLPLSDPSVKGGTDNEPDAIAELETFPLASPIEGSSMKTKLPPIPSFSEFVDSKKAKGDQRKTKHEHSPRVEKRSRLS 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1672 632 MobiDBLite consensus disorder prediction 585 632 - -
Mibi13g1672 632 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 135 369 IPR027417 -
Mibi13g1672 632 Gene3D - 2 136 IPR027417 -
Mibi13g1672 632 Gene3D - 137 362 IPR027417 -
Mibi13g1672 632 TIGRFAM recQ_fam: ATP-dependent DNA helicase, RecQ family 4 347 IPR004589 GO:0004386|GO:0006310
Mibi13g1672 632 Coils Coil 467 494 - -
Mibi13g1672 632 MobiDBLite consensus disorder prediction 606 632 - -
Mibi13g1672 632 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 129 IPR014001 -
Mibi13g1672 632 PANTHER DNA HELICASE RECQ FAMILY MEMBER 5 490 - -
Mibi13g1672 632 FunFam RecQ family DNA helicase 137 362 - -
Mibi13g1672 632 Pfam RecQ zinc-binding 274 345 IPR032284 -
Mibi13g1672 632 CDD SF2_C_RecQ 137 270 - -
Mibi13g1672 632 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 130 IPR027417 -
Mibi13g1672 632 SMART helicmild6 180 261 IPR001650 -
Mibi13g1672 632 CDD DEXHc_RecQ 5 136 - -
Mibi13g1672 632 Pfam Helicase conserved C-terminal domain 157 259 IPR001650 -
Mibi13g1672 632 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 149 305 IPR001650 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1672 169 307 Eukaryotic Initiation Factors Gene Family AT3G19760 22.302 3.08e-07 51.2