LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi13g1669	ATGAATATTTCAGCTACTTTGGAAACTCATAACATGATGTCTGAGAACCAAAAGGTTGACGATAGTAATCTATCAGACAACATTAATGATTTCTTGCAATTTATTCCAAGCGGATTTAAGTTTTTACCAACAGAACAAGAGTTGATTTTGGGCTATTTGAGGAAGAAAGTTATGAATGAACCCTTAGAACCTAATCTAATCCCCGACGTTGAAATCTACAAGCACAATCCTGAACAGCTATCTAGCAGTCGCCAACAGAGCAAGAAGACCAATTGGATCATGCGCGAGTATTATATGGATCGCACAACCCACTCCAGAACAACTCCCTTTGATATGAAGTTAGATGATTGGGTTCTGTGTAAGATTTATAAGAACAATAAGAACTACGTGAAGAACTCGGTAAAGGAGGATGCATATTTAGGAGCATCAGGAATAGAGCCAATTCAAATTATTTCTTCTTCAAAAATATTGCCTCAATCTCAACCTCAGCTATCGCAGCATGAAAGTAACAACTTAGACCGAATTCATCACTTGAATACTCATAATTCAACCTCAACTTTAGATGATGATGTTTGGAATTCTTCAACAATATTGTCTCAATCTCAACCTCAACCTCAACTATCGCAACATGAAAGTAAAAATTTGGATCCAATTCATCGGTTGAATACTCATAATTCAACCTCAAGTTCAGATGATGATGTATGGAATTCTTCAAAAATATTGCCTCAATCTCAACCTCAACTATGTGAAACTTACAATTTGGACCCAATTCATCAGTGGAATACTCATAATTCAACCCCAATTTCAGACGATGCTGTTTGGAATTCTTCAAAAATATTGCCTCAATCTCAACCTCAACTAAGTATATCGAAGCATGAAAGTAACAATTTGGACCCGATACATCAGTTGAATGCTTATAATTCAACCTCAAGTTCAGATGATGATGTTTGGAATTTAATAGACCTTAACAATTTGGATGATTCAAAAATATTGCCTCAATTTCAACCTCAACTATCGCAGCATGGAAGTAACAATTTGGACCCAATTCATCAGTTGAATACTCATAATTCAACCTCAAGTTTAGATGATGATGTTTGGAATTCAGTAGACCTTAACAATTTAGATGTACCGCAAACAATAATGATTTTATGA	1152	0.3524	MNISATLETHNMMSENQKVDDSNLSDNINDFLQFIPSGFKFLPTEQELILGYLRKKVMNEPLEPNLIPDVEIYKHNPEQLSSSRQQSKKTNWIMREYYMDRTTHSRTTPFDMKLDDWVLCKIYKNNKNYVKNSVKEDAYLGASGIEPIQIISSSKILPQSQPQLSQHESNNLDRIHHLNTHNSTSTLDDDVWNSSTILSQSQPQPQLSQHESKNLDPIHRLNTHNSTSSSDDDVWNSSKILPQSQPQLCETYNLDPIHQWNTHNSTPISDDAVWNSSKILPQSQPQLSISKHESNNLDPIHQLNAYNSTSSSDDDVWNLIDLNNLDDSKILPQFQPQLSQHGSNNLDPIHQLNTHNSTSSLDDDVWNSVDLNNLDVPQTIMIL	383

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi13g1669	383	Gene3D	NAC domain	86	131	IPR036093	GO:0003677\|GO:0006355
	Mibi13g1669	383	Gene3D	NAC domain	44	85	IPR036093	GO:0003677\|GO:0006355
	Mibi13g1669	383	MobiDBLite	consensus disorder prediction	219	238	-	-
	Mibi13g1669	383	ProSiteProfiles	NAC domain profile.	35	178	IPR003441	GO:0003677\|GO:0006355
	Mibi13g1669	383	Pfam	No apical meristem (NAM) protein	36	84	IPR003441	GO:0003677\|GO:0006355
	Mibi13g1669	383	MobiDBLite	consensus disorder prediction	218	238	-	-
	Mibi13g1669	383	SUPERFAMILY	NAC domain	33	125	IPR036093	GO:0003677\|GO:0006355
	Mibi13g1669	383	PANTHER	NAC TRANSCRIPTION FACTOR 56	35	81	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi13g1669	Mibi-ChrMibi13	29276828	29280614	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi13g1669	32	148	NAC Transcription Factor Family	AT1G77450	26.111	3.24e-09	55.5