Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1662 ATGTATGGTGATTTATGTACTCTCACAGTGTTAACTGAGCATATGGAGGAGAAGAAGAAGGAGAAGAAGGAAAAGGGAGTGCATTACCGTGGGGTCCGGCGGCGACCATGGGGGAAGTTTGCAGCGGAAATAAGAGACCCGGCAAGGCAAGGGGCAAGGGTGTGGCTGGGCACATTTGAGACAGCTGAAGAGGCAGCAAGAGCATATGACGAAGCAGCATACAACTTTAGGGGTCATCTTGCAATTCTTAATTTCCCTCAAAATTACAATCTTCCTCCTCCTCCGCCATATCAACCATTCTCTTCTTCTGACAGTGCAAGTTCCTCATCAACTTCTGGACAACAAGCCCAAAGGGAAGTTAATGAGTTTGAGTGTTTGGATGATAAGGTATTGGACGAGCTTCTTGAATCTCAAGAGAAGAATAACAAACAAGATTGA 438 0.4566 MYGDLCTLTVLTEHMEEKKKEKKEKGVHYRGVRRRPWGKFAAEIRDPARQGARVWLGTFETAEEAARAYDEAAYNFRGHLAILNFPQNYNLPPPPPYQPFSSSDSASSSSTSGQQAQREVNEFECLDDKVLDELLESQEKNNKQD 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1662 145 PRINTS Ethylene responsive element binding protein signature 52 68 IPR001471 GO:0003700|GO:0006355
Mibi13g1662 145 PRINTS Ethylene responsive element binding protein signature 29 40 IPR001471 GO:0003700|GO:0006355
Mibi13g1662 145 CDD AP2 28 85 IPR001471 GO:0003700|GO:0006355
Mibi13g1662 145 Gene3D AP2/ERF domain 27 88 IPR036955 GO:0003700|GO:0006355
Mibi13g1662 145 SMART rav1_2 28 92 IPR001471 GO:0003700|GO:0006355
Mibi13g1662 145 SUPERFAMILY DNA-binding domain 28 88 IPR016177 GO:0003677
Mibi13g1662 145 MobiDBLite consensus disorder prediction 85 122 - -
Mibi13g1662 145 Pfam AP2 domain 28 79 IPR001471 GO:0003700|GO:0006355
Mibi13g1662 145 MobiDBLite consensus disorder prediction 101 119 - -
Mibi13g1662 145 FunFam Ethylene-responsive transcription factor 2 27 87 - -
Mibi13g1662 145 PANTHER DNA-BINDING DOMAIN 17 139 IPR044808 GO:0003700|GO:0009873
Mibi13g1662 145 ProSiteProfiles AP2/ERF domain profile. 28 86 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1662 Mibi-ChrMibi13 28640769 28641206 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1662 24 140 AP2-EREBP Transcription Factor Family AT3G23230 64.516 1.14e-46 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi13g1662 AP2 9.7e-16 CL0081