Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1658 ATGGAGGAGAAGAAAGAGGAGAAGCCGGAAAAGGAAGTGCGTTACCGTGGGGTCCGGCGGCGACCGTGGGGCAAGTTTGCAGCGGAGATAAGAGACCCGACAAGGCAAGGGGCAAGGGTGTGGCTGGGGACATTTAAGACAGCTGAAGAGGCAGCAAGAGCATATGATGAAGCAGCATACAACTTTAGGGGTCATCTTGCAATTCTTAATTTCCCTCAAAATTACAATCTTCTTCCTCCGCCATATCAACCATTCTCTTCTTCTGACACTGCAAGTTCCTCATCAACTTCTGGACAACACGCCCAAAGGGAAGCTATTGAGTTTGAGTGTTTGGATGATAAGGTACTGGACGAGCTACTTGAATCTCAAGAGAAGAATAACAAACAGGATTTGAGTACTTCATTGTGTTTGTGA 414 0.4686 MEEKKEEKPEKEVRYRGVRRRPWGKFAAEIRDPTRQGARVWLGTFKTAEEAARAYDEAAYNFRGHLAILNFPQNYNLLPPPYQPFSSSDTASSSSTSGQHAQREAIEFECLDDKVLDELLESQEKNNKQDLSTSLCL 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1658 137 Gene3D AP2/ERF domain 13 74 IPR036955 GO:0003700|GO:0006355
Mibi13g1658 137 PRINTS Ethylene responsive element binding protein signature 38 54 IPR001471 GO:0003700|GO:0006355
Mibi13g1658 137 PRINTS Ethylene responsive element binding protein signature 15 26 IPR001471 GO:0003700|GO:0006355
Mibi13g1658 137 SUPERFAMILY DNA-binding domain 14 74 IPR016177 GO:0003677
Mibi13g1658 137 PANTHER DNA-BINDING DOMAIN 5 124 IPR044808 GO:0003700|GO:0009873
Mibi13g1658 137 ProSiteProfiles AP2/ERF domain profile. 14 72 IPR001471 GO:0003700|GO:0006355
Mibi13g1658 137 CDD AP2 14 72 IPR001471 GO:0003700|GO:0006355
Mibi13g1658 137 FunFam Ethylene-responsive transcription factor 2 13 73 - -
Mibi13g1658 137 Pfam AP2 domain 14 65 IPR001471 GO:0003700|GO:0006355
Mibi13g1658 137 MobiDBLite consensus disorder prediction 80 102 - -
Mibi13g1658 137 MobiDBLite consensus disorder prediction 79 103 - -
Mibi13g1658 137 SMART rav1_2 14 78 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1658 Mibi-ChrMibi13 28383595 28384008 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1658 10 125 AP2-EREBP Transcription Factor Family AT3G23230 63.415 2.28e-47 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi13g1658 AP2 1.6e-15 CL0081