Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1639 ATGATGATGATGATGATGATCAGATTTCAATTTCTGCGTTCCCAGTTATGGCTGCTAGTTTCAGTTTCTTTTATGGTTACAGCTTGTTTGGGAGACAATGACATAGCTGCACAGTTGAATGATGATGTTCTTGGTTTGATAGTGTTTAAATCTGACCTTTCTGACCCTTCTGGTCATCTTGCTTCATGGAATGAAGATGATGTAAGTGCTTGCTCATGGCGGTTTGTGCAGTGTAATCCGGCTACCGGTAGAGTTTCTGAGGTCTCACTTGATGGATTGGGCTTATCTGGGAAAATAGGAAGAGGTCTTGAGAATTTGCAGCATCTCAAGGTATTGTCACTTTCTCATAACAACATAACTGGAAGTATTAGTCCATCACTTTCTCTTTCAAACACTCTTCAAAGCCTAAACCTCAGTCACAACAGTTTATCTGGTACTATTCCAAGTTCTTTTGTGAATATGGCTTCAATGAAGTCTCTTGATCTATCTGAGAATTCTTTCTCAGGACAAGTACCAGAAAGCTTGTTCCAAAACTGTTTTTCCCTTCATCATCTTTCTCTGGCTAGAAACATGTTTGAGGGATCAATTCCCAGCACAATCTCAAGATGTTCCTTAATGAACAGCCTTGATCTTTCAAGAAATCGGTTCGGTGGTAGTGTGGACTTCAATGGGATTTGGTCTTTAACAAGGCTTAGGACTTTGGATCTGTCAAATAATGCCTTATCTGGAACTTTGCCTCCTGGGTTATCAGCCATACATAACTTGAAAGAGATGCTACTACAAGGTAATCACTTTTCTGGACCATTGCCTTCTGATATTGGACTGTGCTTGCATTTGGATAGATTGGATGTTAGTGATAATCTGTTCAGTGAAGAACTTCCAGAGTCACTTGGGAGACTTAATTTCTTGAACTCCTTCAAGGCATCAAATAATTTGTTAACCAATGAAATTCCTCAGTGGATTGGTAACATGGCAAGTCTGGAATATTTTGATCTCTCAGGAAATCAGTTATCCGGAACCATCCCGGATTCAATCGGTGATTTGAGATCACTGAGTTATCTAAGTTTATCAGATAACAAGCTTGTGGGAAACATTCCATCATCATTGGTTTCATGTACTAAGTTATCATCCATTCATCTCAGAGGCAATGGTTTCAATGGTAGCATACCAGAGGGACTGTTTGGCCTGGAATCACTAGAGGAAATAGACCTATCTCATAATGAGCTAAAGGGTGAAATTCCTGCAGAAATTATTCATGCTTTTAAACTAAAATATTTGAATCTATCTTGGAATGATTTTCACTCTCAAATGCCCCCTGAGTTGGGTATGCTTCAGAATCTGACAGTTTTAGATCTTCAGAGCAATTCACTTTATGGTTCTATTCCAGAGGATTTATGTGATTCAGGCAATTTGGCTATTCTTCAACTGGATGGAAACACATTGAATGGTGCTATCCCAGATGAGATTGGGAATTGCACATCTCTCTACTTGCTGAGCTTGTGTCACAATAACTTGAGTGGTTCAATTCCCAAGTCCATGTCGAAGCTTAAAGAGCTCAAAGTTCTTAAATTGGAATACAATGAACTGAGTGGAGAGATACCACAGGAGCTTGGAATGCTGCAGAATCTTCTTGCTGTGAATATATCATACAACAGACTCACAGGAAGGCTTCCAGGTAGTAGCATATTTCAAAACTTAGACAAAAGTTCCCTAGAAGGAAACTTAGGTCTTTGTTCACCCTTACTGAAAGGGCCATGTAAGATGGATGTGCCGAAGCCACTGGTTCTTGACCCAAATGCCTATAACAACCAAATGGGTAGGCCAAGAAATGAATCATCCACGAGCATGCCAAGCATCATTCATCACCATCGGTTCCTGAGTATTTCAGTTATTATTGCGATTTCTGCAGCTTTTGTGATCATATTGGGTGTCATTGCTATTAGCCTTTTGAATGTTTCTGTAAGGAGAAAGCTGGCATTTGTTGATAATGCTTTGGAAAGCATGTGTTCATCCTCTTCAAGATCAGGAAGTCCACCCACAGGAAAGCTCATTCTGTTCGATTCAGGCCGGTCCTCACTCGATTCAATTAGCAACCCAGAAAACTTGCTGAACAAGGCATCCGAGATAGGAGATGGAGTGTTTGGAACAGTGTACAAGGTTCCTTTGGGATCACAAGGTAGAATGGTGGCAATCAAGAGGCTTGTGACTTCAAACATAGTCCAATACCCTGAAGACTTCGATAGGGAAGTAAGAATCTTAGGGAAAGCAAGGCACCCTAATCTAATAGCATTGAAAGGGTACTATTGGACTCCTCAACTGCAACTTTTGGTCACAGAATATGCACCAAATGGTAGCTTACAAGCTAAGCTACATGATCGGCTTCCTTCATCTCTACCTCTTTCATGGGCTAATAGGTTCAAAATTTTGCTTGGAACAGCAAAAGGGCTGGCTCACTTGCACCATTCATTCCGCCCTCCAATCATTCACTACAACTTGAAGCCAAGCAATATTCTACTCGATGAGAACTGCAATCCAAAGATTTCAGATTTCGGACTGGCTCGGCTTCTGACAAAACTAGAAAGGCATGTGATGAGCAATAGGTTTCAGAGTGCCTTAGGATATGTAGCACCAGAATTGGCATGCCAGAGCTTGAGGGTGAATGAGAAGTGTGATATCTATGGCTTTGGGGTGATGATTCTGGAGATTGTGACTGGAAGGAGACCGATTGAATACGGAGAAGACAATGTTGTTATATTGAAAGACCATGTCAGGGTGATGCTTGAGCATGGAAATGTGTTGGAATGTGTAGATCCAAGCATGAGTGAGTATCCTGAAGATGAGGTTCTTCCTGTTCTGAAGCTTGCATTGGTTTGCACCTCACAGATACCTTCAAGCAGGCCTTCCATGGCAGAAGTAGTTCAAATTCTGCAGGTCATCAAAACTCCTGTTCCTCACAGAATGGAAATGTTTTAG 2973 0.4114 MMMMMMIRFQFLRSQLWLLVSVSFMVTACLGDNDIAAQLNDDVLGLIVFKSDLSDPSGHLASWNEDDVSACSWRFVQCNPATGRVSEVSLDGLGLSGKIGRGLENLQHLKVLSLSHNNITGSISPSLSLSNTLQSLNLSHNSLSGTIPSSFVNMASMKSLDLSENSFSGQVPESLFQNCFSLHHLSLARNMFEGSIPSTISRCSLMNSLDLSRNRFGGSVDFNGIWSLTRLRTLDLSNNALSGTLPPGLSAIHNLKEMLLQGNHFSGPLPSDIGLCLHLDRLDVSDNLFSEELPESLGRLNFLNSFKASNNLLTNEIPQWIGNMASLEYFDLSGNQLSGTIPDSIGDLRSLSYLSLSDNKLVGNIPSSLVSCTKLSSIHLRGNGFNGSIPEGLFGLESLEEIDLSHNELKGEIPAEIIHAFKLKYLNLSWNDFHSQMPPELGMLQNLTVLDLQSNSLYGSIPEDLCDSGNLAILQLDGNTLNGAIPDEIGNCTSLYLLSLCHNNLSGSIPKSMSKLKELKVLKLEYNELSGEIPQELGMLQNLLAVNISYNRLTGRLPGSSIFQNLDKSSLEGNLGLCSPLLKGPCKMDVPKPLVLDPNAYNNQMGRPRNESSTSMPSIIHHHRFLSISVIIAISAAFVIILGVIAISLLNVSVRRKLAFVDNALESMCSSSSRSGSPPTGKLILFDSGRSSLDSISNPENLLNKASEIGDGVFGTVYKVPLGSQGRMVAIKRLVTSNIVQYPEDFDREVRILGKARHPNLIALKGYYWTPQLQLLVTEYAPNGSLQAKLHDRLPSSLPLSWANRFKILLGTAKGLAHLHHSFRPPIIHYNLKPSNILLDENCNPKISDFGLARLLTKLERHVMSNRFQSALGYVAPELACQSLRVNEKCDIYGFGVMILEIVTGRRPIEYGEDNVVILKDHVRVMLEHGNVLECVDPSMSEYPEDEVLPVLKLALVCTSQIPSSRPSMAEVVQILQVIKTPVPHRMEMF 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1639 990 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 296 389 - -
Mibi13g1639 990 Gene3D Ribonuclease Inhibitor 40 197 IPR032675 -
Mibi13g1639 990 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 781 985 - -
Mibi13g1639 990 SUPERFAMILY Protein kinase-like (PK-like) 703 985 IPR011009 -
Mibi13g1639 990 PANTHER RECEPTOR-LIKE PROTEIN 55 316 977 - -
Mibi13g1639 990 PRINTS Leucine-rich repeat signature 396 409 - -
Mibi13g1639 990 PRINTS Leucine-rich repeat signature 231 244 - -
Mibi13g1639 990 Pfam Protein kinase domain 705 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g1639 990 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 200 294 - -
Mibi13g1639 990 Gene3D Ribonuclease Inhibitor 297 589 IPR032675 -
Mibi13g1639 990 ProSiteProfiles Protein kinase domain profile. 703 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g1639 990 Gene3D Phosphorylase Kinase; domain 1 703 784 - -
Mibi13g1639 990 SMART LRR_sd22_2 444 467 - -
Mibi13g1639 990 SMART LRR_sd22_2 396 428 - -
Mibi13g1639 990 SMART LRR_sd22_2 324 356 - -
Mibi13g1639 990 SMART LRR_sd22_2 228 257 - -
Mibi13g1639 990 SMART LRR_sd22_2 106 129 - -
Mibi13g1639 990 Pfam Leucine rich repeat N-terminal domain 40 79 IPR013210 -
Mibi13g1639 990 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 697 780 - -
Mibi13g1639 990 Gene3D Ribonuclease Inhibitor 198 295 IPR032675 -
Mibi13g1639 990 SMART LRR_typ_2 324 347 IPR003591 -
Mibi13g1639 990 SMART LRR_typ_2 444 468 IPR003591 -
Mibi13g1639 990 SMART LRR_typ_2 228 252 IPR003591 -
Mibi13g1639 990 SMART LRR_typ_2 154 178 IPR003591 -
Mibi13g1639 990 SMART LRR_typ_2 106 130 IPR003591 -
Mibi13g1639 990 SMART LRR_typ_2 516 540 IPR003591 -
Mibi13g1639 990 SMART LRR_typ_2 396 420 IPR003591 -
Mibi13g1639 990 SMART LRR_typ_2 348 372 IPR003591 -
Mibi13g1639 990 Pfam Leucine Rich repeat 106 121 IPR001611 GO:0005515
Mibi13g1639 990 FunFam Inactive leucine-rich repeat receptor-like protein kinase 402 589 - -
Mibi13g1639 990 Pfam Leucine rich repeat 309 361 IPR001611 GO:0005515
Mibi13g1639 990 Pfam Leucine rich repeat 132 174 IPR001611 GO:0005515
Mibi13g1639 990 Pfam Leucine rich repeat 374 433 IPR001611 GO:0005515
Mibi13g1639 990 CDD STKc_IRAK 709 977 - -
Mibi13g1639 990 SUPERFAMILY L domain-like 39 219 - -
Mibi13g1639 990 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 39 199 - -
Mibi13g1639 990 ProSiteProfiles Leucine-rich repeat profile. 108 130 IPR001611 GO:0005515
Mibi13g1639 990 Gene3D Transferase(Phosphotransferase) domain 1 785 987 - -
Mibi13g1639 990 SUPERFAMILY RNI-like 223 562 - -
Mibi13g1639 990 ProSitePatterns Protein kinases ATP-binding region signature. 709 732 IPR017441 GO:0005524
Mibi13g1639 990 Pfam Leucine Rich Repeat 230 249 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1639 Mibi-ChrMibi13 27730078 27734072 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1639 18 987 Receptor kinase-like Gene Family AT3G28040 62.014 0.0 1201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Mibi13g1639 Pkinase 1e-43 CL0016