Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1589 ATGGAAAATAATAAGGTGATGAGTGATGAACAAAGAGAGACACTAAAAATGCAAATAACACTGTATCGCTACATATGTGACATGCTTGCTGATACGTACTACAGCCTCATGCTTCAGCCACAGATGGATCTTCCACTTCCAGAAGTTAAGGTAGAAAACACATCACCACCACCAGAACAACAACAAGAGCCATTGATGTTGAACAGCAAAAAGAGTAGACGAAAGCGATGGACTCCAACGCCACAACAACTTGAGATTCTAAATGGTATATTCGAGGAAAGCGGCAGATCTCCTCCGAACAAGCACAAGATCAAGGAAATTACTGCAGTATTGAGCCGCCATGGCAAAATTTCTGAGACAAATGTGTACACATGGTTCCAAAACCGGCGTGCTAGAATGAAGAGGAAGATGGAGAGCAATGTAGGAGGACTTGATGATCACATTAATCAACAACAAATGATGATGAAGATGTTTCAAGCTGAGCAGTTAGGTTCTGCCAGTACAAGTTATAATAGTAATGGTCATAATTCTACTCAAGTTGAGTCCATATCTAGTGTTGATAATTATGTGATGAGATTCTTGAGAGAGTGA 591 0.4027 MENNKVMSDEQRETLKMQITLYRYICDMLADTYYSLMLQPQMDLPLPEVKVENTSPPPEQQQEPLMLNSKKSRRKRWTPTPQQLEILNGIFEESGRSPPNKHKIKEITAVLSRHGKISETNVYTWFQNRRARMKRKMESNVGGLDDHINQQQMMMKMFQAEQLGSASTSYNSNGHNSTQVESISSVDNYVMRFLRE 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1589 196 PANTHER WUSCHEL-RELATED HOMEOBOX 13 5 155 IPR044559 GO:0003700
Mibi13g1589 196 MobiDBLite consensus disorder prediction 49 78 - -
Mibi13g1589 196 Pfam Homeodomain 73 135 IPR001356 GO:0003677
Mibi13g1589 196 SUPERFAMILY Homeodomain-like 68 138 IPR009057 -
Mibi13g1589 196 CDD homeodomain 73 137 IPR001356 GO:0003677
Mibi13g1589 196 ProSiteProfiles 'Homeobox' domain profile. 70 136 IPR001356 GO:0003677
Mibi13g1589 196 SMART HOX_1 72 140 IPR001356 GO:0003677
Mibi13g1589 196 Gene3D - 72 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1589 Mibi-ChrMibi13 26300018 26301948 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1589 5 136 Wox Gene Family AT4G35550 47.761 7.18e-31 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mibi13g1589 Homeodomain 5.4e-17 CL0123