Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1571 ATGCAGAAGGGTTGTTTTGGCTTTGAGAACGTTATTTTTCAAAAGGGTTGTGAGCTGCTATGTTGTATCTTTGGATGGATTAAAGAGAAAAGACATATTGGATCAATGTTTAAAACAGTAGCATCTGGACTTTCAATTTTGTTACTCCTCCAATGTGTATCTGCAACAGATAATGAATTTCCCAGATGTAACTGTGATGATGAGGCCAGCTTGTGGACTATTGAGAGTATTCTGGAGTGTCAGCGAGTCAGTGATTTGTTGATTGCTGTGGCCTATTTCTCCATACCCATTGAGCTGCTTTGTTTTATTAGTTGTGCGAATGTCCCATTCAAATGGGTTCTTGTTCAGTTCATTGCCTTCATTGTACTATGTGGATTGACACATTTGCTGAATGCATGGACTTATGGTCCTCACTCATTCCACCTGATGGTGGCACTTACAGTATTCAAAACTCTTACGGCTTTGGTATCGTGTGCCACTGCTATCACTCTCATGACTCTCATTCCTTTACTTCTTAAGGTGAAGGTCAGAGAATTAATGCTGAGGAAAAAGACCTCTGAACTTGGGCGAGAGGTTGGAATTATAATGAGGCAGAAGGAGGCTGCAAAACACGTAAGGATGCTCACTCGAGAGATTCGCAAGTCACTTGATAGGCATAATATTTTGTACACCACATTGGTGGAGCTGTCTGAAACACTTGGTTTGCAAACTTGTGCAGTCTGGATGCCTAATTTTGATAAAACAGAGATGAACCTCACTCATGAATTGAATGGGAGAAATCTTAATATTTCTATACCAATTATGGATCCAGATGTTGTGAAAATTAAGGCAAGTGATGGAGTTAATATTCTCAGCTTTGCCTCAGCACTTGTTGCTGCTAGTAGTGGAAGTTCTTCTGAGGCAGGACCGGTGGCTGCAATTCGTATGCCGATGCTTCGGATTTGCAATTTCAAAGGTGGAACGCCTGAGGTAAGGCAGTTATGTTATGCAATATTGGTTCTGATTCTTCCTGGTGGAGAGCCAAGATCTTGGAGCAATCAGGAGCTGGAAATAGTTAAAACGGTTGCTGATCAGGTTGCTGTAGCCCTCTCTCATGCTGCAATCCTTGAAGAGTCCCAACTCATGAGAGAGAAGTTGGAGGAGCAAAATCGAATTCTACAACAGGCACAAAGCAATGCTTTGATGGCAAGTCAGGCAAGAAACTTATCTCAGAAGGTCATGAGTGACGGAATGAGAAGACCAATGCACTCAATTTTGGGTTTGCTTTCAATTATACAAGAGGAGAATTTGAAAAGCGAACAGAAACTCATCGTAGATTCGATGCTGAGAACCAGCAATGTCCTATCAAACTGGATAAATGATGCCATGAACATTTCAGCCAAGGATGATGGGGGATTTCCATTGGAGATGAGATCTTTTGGGTTACATGCCATGATTAAAGAAGCAGCATGCCTTGCCAAGTGTCTTTGCATTTATAGGGGATTTGGCTTTAAAATTGAGTGTGAGAAGTCTTTGCCTGACAACATTATGGGTGATGAAAGGAGGGTTTTTCAGGTGATTCTACATATGGTTGGCAACTTATTGAATGGTAATCACAGGGGAGGGATTCTTGTACTTCGCGTTCTTGCGGAAAGAGGAAGTCAGGAAATAAATGACTATGGGTGGACAGCCTGGAGACCAAGCTCATCCAGTGGGGATGTACATATTAGATTTGAGATAGGGATCACTAGATGCAATTATGAGTTGGAGATTCCACTTTCTTTAGGAGTTGGCAGTAGAAAATATTCTAGTTGTAGAGACGAAGTCAGATTGAGCTTTAACATTTGCAAGAGGATTGTTCAGTTGATGCAAGGGAACATATGGTTTGCACCAAATACCTTAGGTTATCCTCAAACCATGGCCCTTGTTCTTCGGTTTCATTTACGACAGTCTATTTCTATTTTCATCTCTGAGCCTGGTGAATCCTCTGAGCGCACAGATTCTAATTCTCTGCTCAGAGGTCTGCAAGTCTTGTTGGCTGATAATGATGATGTAAATAGAGCTGTCACACAAAAGTTGCTTCAGAAGCTAGGTTGTGTGGTAACTTCAGTTTCTTCAGGATTTGAATGTCTTGCCGTCATTGCACCCGCTGGATGTTCTATTCAAGTCATTCTTTTGGATCTTCATATGCCTGAGTTAGATGGCTTTGAAGTTGCCACAAGGATTCGGAAATTTAGAAGCCGAAGTTGGCCAATGATTGTTGCCTTCACTGCAAGTACTGATGAAGATTTGCGTGAAAGATGTATGCAAATCGGTATCAGTGGAGTTATAAGAAAACCTGTTATGTTGCAGGAAATTGCCAGTGAACTTCGGAGGATTCTGATGCATGCACGGAATTGA 2379 0.4166 MQKGCFGFENVIFQKGCELLCCIFGWIKEKRHIGSMFKTVASGLSILLLLQCVSATDNEFPRCNCDDEASLWTIESILECQRVSDLLIAVAYFSIPIELLCFISCANVPFKWVLVQFIAFIVLCGLTHLLNAWTYGPHSFHLMVALTVFKTLTALVSCATAITLMTLIPLLLKVKVRELMLRKKTSELGREVGIIMRQKEAAKHVRMLTREIRKSLDRHNILYTTLVELSETLGLQTCAVWMPNFDKTEMNLTHELNGRNLNISIPIMDPDVVKIKASDGVNILSFASALVAASSGSSSEAGPVAAIRMPMLRICNFKGGTPEVRQLCYAILVLILPGGEPRSWSNQELEIVKTVADQVAVALSHAAILEESQLMREKLEEQNRILQQAQSNALMASQARNLSQKVMSDGMRRPMHSILGLLSIIQEENLKSEQKLIVDSMLRTSNVLSNWINDAMNISAKDDGGFPLEMRSFGLHAMIKEAACLAKCLCIYRGFGFKIECEKSLPDNIMGDERRVFQVILHMVGNLLNGNHRGGILVLRVLAERGSQEINDYGWTAWRPSSSSGDVHIRFEIGITRCNYELEIPLSLGVGSRKYSSCRDEVRLSFNICKRIVQLMQGNIWFAPNTLGYPQTMALVLRFHLRQSISIFISEPGESSERTDSNSLLRGLQVLLADNDDVNRAVTQKLLQKLGCVVTSVSSGFECLAVIAPAGCSIQVILLDLHMPELDGFEVATRIRKFRSRSWPMIVAFTASTDEDLRERCMQIGISGVIRKPVMLQEIASELRRILMHARN 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1571 792 CDD REC_ETR-like 668 783 - -
Mibi13g1571 792 Gene3D - 668 792 - -
Mibi13g1571 792 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 59 790 - -
Mibi13g1571 792 CDD HATPase_ETR2_ERS2-EIN4-like 505 637 - -
Mibi13g1571 792 SMART REC_2 668 783 IPR001789 GO:0000160
Mibi13g1571 792 Pfam Response regulator receiver domain 670 782 IPR001789 GO:0000160
Mibi13g1571 792 Coils Coil 369 392 - -
Mibi13g1571 792 CDD HisKA 397 459 IPR003661 GO:0000155|GO:0007165
Mibi13g1571 792 SMART gaf_1 217 373 IPR003018 GO:0005515
Mibi13g1571 792 Pfam GAF domain 217 363 IPR003018 GO:0005515
Mibi13g1571 792 Gene3D - 465 643 IPR036890 -
Mibi13g1571 792 PIRSF Ethylen_sen_hybr_HK 36 792 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Mibi13g1571 792 FunFam Ethylene receptor 4 366 460 - -
Mibi13g1571 792 Gene3D - 203 374 IPR029016 -
Mibi13g1571 792 SUPERFAMILY CheY-like 666 787 IPR011006 -
Mibi13g1571 792 FunFam Ethylene receptor 666 790 - -
Mibi13g1571 792 SUPERFAMILY GAF domain-like 221 366 - -
Mibi13g1571 792 ProSiteProfiles Response regulatory domain profile. 669 787 IPR001789 GO:0000160
Mibi13g1571 792 Gene3D - 385 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1571 Mibi-ChrMibi13 25721325 25724534 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1571 57 790 Miscellaneous Gene Families AT3G04580 56.325 0.0 802
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mibi13g1571 GAF 6.2e-11 CL0161