Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1544 ATGGCAAGTTTGAATCTGAAGGAGACGGAGCTGTGCCTGGGATTACCCGGTGGTGGCGGTGGTGAGGCGGTGGAAACCGCCGCCACTCCCAAGGCATCATTAGGGAACAAGAGAGCCTTTTCTGCAACTGTGGATCTCAAACTCAACCTTGCTGATGATTGCAAGGATGATGCTGGAGAAGAAAAAGATCTCACCAATAATCAGGACCACAAGAATATGGCCTCCTCTAAGAAGGATCTAACTAAGCCACCTGCTAAGGCACAAGTGGTGGGTTGGCCACCAGTCAGGTCATATAGGAAGAACGTGATGGCACATAATAAGGTGAGTAGTGAGGAGGGTAATGATACTGAGAAGAAGTCGGCAGTTGTGGCGCCGGTGCCGGCGACCGGCGGAGGATCATATGTAAAGGTGTGTATGGATGGTGCACCTTATCTTAGGAAGGTAGATTTGAAGATGTACAAAAGCTACCAGCAACTTTCTGATGCCTTGGCCAAAATGTTCAGCTCCTTCACCATGGGGAAGTATGAGGGGGCCCATGCCCAAGGGATGATAGACTTCATGAATGAGAGCAAGTTGATGGATCTGCTGAACAGTTCTGAGTATGTGCCAACCTATGAAGATAAGGATGGTGATTGGATGCTCGTTGGTGATGTCCCATGGCAGATGTTCGTTGATTCATGCAAGCGTCTCCGAATAATGAAAGGATCAGAAGCCATTGGATTGGCCCCAAGAGCCGTGGAAAAATGCAAAAGCATCAGAAGCTGA 765 0.4889 MASLNLKETELCLGLPGGGGGEAVETAATPKASLGNKRAFSATVDLKLNLADDCKDDAGEEKDLTNNQDHKNMASSKKDLTKPPAKAQVVGWPPVRSYRKNVMAHNKVSSEEGNDTEKKSAVVAPVPATGGGSYVKVCMDGAPYLRKVDLKMYKSYQQLSDALAKMFSSFTMGKYEGAHAQGMIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWQMFVDSCKRLRIMKGSEAIGLAPRAVEKCKSIRS 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1544 254 MobiDBLite consensus disorder prediction 59 77 - -
Mibi13g1544 254 Gene3D - 128 247 - -
Mibi13g1544 254 SUPERFAMILY CAD & PB1 domains 130 234 - -
Mibi13g1544 254 ProSiteProfiles PB1 domain profile. 132 235 IPR000270 GO:0005515
Mibi13g1544 254 FunFam Auxin-responsive protein 128 245 - -
Mibi13g1544 254 Pfam AUX/IAA family 8 244 IPR033389 -
Mibi13g1544 254 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 4 240 IPR003311 GO:0005634|GO:0006355
Mibi13g1544 254 MobiDBLite consensus disorder prediction 59 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1544 Mibi-ChrMibi13 24664470 24667119 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1544 128 243 B3 DNA Binding Superfamily AT4G23980 30.172 5.09e-08 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mibi13g1544 AUX_IAA 9.2e-85 CL0072