Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1543 ATGGAAAACAAAGTGGCTTATGTGAATGATCTGAATCTCAAGGATACAGAGCTCAGATTGGGCCTGCCAGGAAGTGAAGAAGAACAAAAATCACTGGTTAGCTCTAAAAACAACAAGAGGGCTTTATCTGAAGCTTCTGAGGATTGTGGAACAAAGGGTTCTAAAGAATCAGCTCCTCCAGCCAAGGCAAAGATTGTGGGGTGGCCTCCAATCAGATCTTACAGGAAGAACAGCTTGCAGCAGGAGGCTGAGGCTTCTGGGATTTATGTGAAAGTGAGTATGGATGGAGCTCCATACCTCAGGAAGATTGATTTGAAGGTTTATAATGGTTATCCAGAACTCCTCAAGGCATTAGAAAACATGTTCAAGTTAACCATAGGTCAGTACAATGAAAGAGAGGGTTACAAAGGGTCAGAATTTGCACCTACATATGAGGACAAGGATGGTGACTGGATGCTTGTTGGAGATGTTCCGTGGGACATGTTTATGACTTCCTGCAAAAGACTAAGAATCATGAAAGGATCAGAAGCTAGTGGTTTGGGTTGTGGAGTTTGA 555 0.4306 MENKVAYVNDLNLKDTELRLGLPGSEEEQKSLVSSKNNKRALSEASEDCGTKGSKESAPPAKAKIVGWPPIRSYRKNSLQQEAEASGIYVKVSMDGAPYLRKIDLKVYNGYPELLKALENMFKLTIGQYNEREGYKGSEFAPTYEDKDGDWMLVGDVPWDMFMTSCKRLRIMKGSEASGLGCGV 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1543 184 FunFam Auxin-responsive protein 82 184 - -
Mibi13g1543 184 MobiDBLite consensus disorder prediction 20 62 - -
Mibi13g1543 184 ProSiteProfiles PB1 domain profile. 87 174 IPR000270 GO:0005515
Mibi13g1543 184 SUPERFAMILY CAD & PB1 domains 78 173 - -
Mibi13g1543 184 Pfam AUX/IAA family 43 181 IPR033389 -
Mibi13g1543 184 Gene3D - 81 184 - -
Mibi13g1543 184 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 11 179 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1543 Mibi-ChrMibi13 24496045 24496970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1543 80 180 B3 DNA Binding Superfamily AT2G46530 33.663 6.49e-11 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mibi13g1543 AUX_IAA 4.7e-55 CL0072