Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1531 ATGCCCAACGATACTGTGTCGTCGATCGCGAGCCGGTTCGGATCGAAACCGCAGTCGATAATTGATAGTAACCGTAAGGGTTTTCGGGAATTTGACACGATTTTCGTCCCGGTTTCGCGGTTGCCGGGGAATACGGAGATTCCGGTGAACAATACGGCGGCGGCGCCGCCGCCTGCGGTGGTTACGGTGGGTTCCGGCGGGAGGACGGGGACTGTGAGGGGATTGGCGATTGGGTTGGGGGTTTTAGGGTTTTTGTTGATTTTGGCTTTGGGGGTATGGATTTACAGGGAGGGGTTGATGAAGAAGAGGATGGAGATGGTGATGGTAGGGGATGAAGAGAAGAGGAAAGAGAGTTTTGTGATGAAGGGAACGAAGAAGGAGGAGGAGGTGAGGTTGATGGCGAATGTTTCAGATTGTTTGGATAAGTATAGGGTTTTTGGGTATGATGAATTGAGGGAAGCTACTAATGGGTTTGATCAGAGTTGCTTGATTCTTGGGTCTGTGTATAAAGGTACCATTGATGGAGAAGTCTTTGCCATCAAGAAGATGAAGTGGAATGCTTACGAGGAGCTCAAGATCTTGCAGAAGGTTAACCATGGGAATTTGGTGAAGTTAGAGGGCTTTTGCATAGATGATGATGAAACAAACTGCTATCTAGTTTATGAATATGTTGAAAACGGATCCCTCTACTCATGGTTGCACGAAGATCGGATTGACCGTCTGAATTGGAAGATGAGGCTACACGTCGCCATCGATGTAGCCAATGGCTTGCAGTACATCCACGAGCACACAAGGCCAAGAGTTGTGCACAAGGACATAAAAAGTAGCAACATTCTCTTAGACGCCAATATGAGAGCCAAGATAGCTAACTTTGGACTCGCAAAGTCTGGAATGAATGCCATCACAATGCACATTGTGGGAACTCAGGGTTACATAGCTCCAGAATACCTAGCCGATGGTGTGGTGTCGACTAAGATGGATGTGTTCTCTTTTGGAGTCGTTCTGCTTGAACTAATCACAGGTAAAGAGGCCGTTGATGATAGAGGGAATCCCCTGTGGACAAGTGTGGTAAGATCTTTTGAAGGGGCTAATGAGCAAGAAAAGAGCAAGAGGCTAAGGGAATGGTTGGATAGTTCCCTTATGAGAGAAACATGCTCAATGGAGAGTCTCATGGGTGTGCTTAATATTGCCCTTGCTTGCTTGCATAAGGATCCATCAAAGAGGCCTAGTATGGTGGATATTGTTTATGCTTTAAGTAAAAGTGAAGATTCAAATTTTGATACCTCGGATGATACCATAGGTTCTCCATTGGTATCAGCAAGGTGA 1326 0.463 MPNDTVSSIASRFGSKPQSIIDSNRKGFREFDTIFVPVSRLPGNTEIPVNNTAAAPPPAVVTVGSGGRTGTVRGLAIGLGVLGFLLILALGVWIYREGLMKKRMEMVMVGDEEKRKESFVMKGTKKEEEVRLMANVSDCLDKYRVFGYDELREATNGFDQSCLILGSVYKGTIDGEVFAIKKMKWNAYEELKILQKVNHGNLVKLEGFCIDDDETNCYLVYEYVENGSLYSWLHEDRIDRLNWKMRLHVAIDVANGLQYIHEHTRPRVVHKDIKSSNILLDANMRAKIANFGLAKSGMNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELITGKEAVDDRGNPLWTSVVRSFEGANEQEKSKRLREWLDSSLMRETCSMESLMGVLNIALACLHKDPSKRPSMVDIVYALSKSEDSNFDTSDDTIGSPLVSAR 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1531 441 ProSiteProfiles Protein kinase domain profile. 140 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g1531 441 SUPERFAMILY Protein kinase-like (PK-like) 142 418 IPR011009 -
Mibi13g1531 441 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 2 423 - -
Mibi13g1531 441 SMART serkin_6 158 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g1531 441 Gene3D Transferase(Phosphotransferase) domain 1 224 434 - -
Mibi13g1531 441 Gene3D Phosphorylase Kinase; domain 1 127 223 - -
Mibi13g1531 441 FunFam PTI1-like tyrosine-protein kinase 3 224 432 - -
Mibi13g1531 441 Pfam Protein kinase domain 166 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g1531 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 268 280 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1531 Mibi-ChrMibi13 24174278 24177504 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1531 140 435 Receptor kinase-like Gene Family AT2G33580 39.423 2.05e-64 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mibi13g1531 Pkinase 1.1e-42 CL0016