Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1527 ATGGAACCAAACATCACCAACCCATCTCCGCCGTTACCGTCACCGTCACCCTCCGCCGTTACCATCCTCGGAAAATACCAACTCATCCGTCTCCTAGGCCGAGGCAGCTTCGCCAAGGTCTACCAAGCCAAATCCCTAACCGACAACTCCATCGTCGCCGTCAAAATCATCGACAAGTCCAAAACTGACGCCGCCATGGAACCTCGTATCCTCCGAGAAGTCGACGCAATGCGCCGCCTCCACCACCACCCCCACATCCTCAAAATCCACGAAGTCCTCGCCACCAAAACAAAAATCTACCTCATCGTCGATTTCGCCCCCGGCGGCGAACTCTTCTCCAAGATCACACGCAAAGGAAAATTCACCGAACCAATTGCAAGAAGATATTTCCAGCAATTGGTCTCGGCTCTCTGTTTCTGCCATAAAAACGGCGTTATCCATCGAGATCTTAAACCTCAGAATCTTTTGTTAGATCATGAGGGGAATCTTAAGGTTTCGGATTTCGGGCTTTCGGCGTTGCCGGAACAGCTGAAAAATGGGTTGCTTCATACGGCTTGTGGTACTCCGGCGTATACGGCGCCGGAGATACTTTTCCGGCGAGGCTACGACGGGTCGAAGGCCGACGCGTGGTCGTGCGGGCTAATTCTCTTCGTTCTCCTCGCCGGTTACCTTCCGTTCTCCGATTCGAACATACCGGAGATGTGCCGGAAGATCAGCCGGCGGGATTATAAGTTCCCGGATTGGATTTCGAGGCCGGCCCGGTTCGTGATTTACCGGTTGCTTGACCCGAACCCGAAGAACCGGATGGGCTTGGAAGCTCTGTATGGGAATTCTTGGTTTAAGAAATCTCTGCAGGCCCGGCCCGATGACAGCTTATTCGGGCCGGGTCAGGCCCGGCCCGGGAAGGTGGAGAGGGTGGGATCGGGGGTGAATGCTTTTGATATAATTTCGATGTCTTCGGGATTGGACTTGACGGGGTTGTTTGAAACGACGTCTGATTGTAATAGGAGAGAGAAGAGGTTTACATCGAATGCTTCAACGGTGGTGGTGGAGGAGAAAGTGAAGGAAGTTGGGGGTATTTTGGGGTTTAAGGTTGAGATTGGGAAGGATGGAGTGATTGGGTTAGGGAAAGGGAAGGTTGTTATTGTGGTGGAGGTTTTTGAGATTGTTCCTGATGAGTTGTTGATGGTGAATGTCAAAGTTATGAATGGTGGGTTTGAGTTTGATGAACTTCACTGGGGAGAATGGAAATCTGGGCTTCAAGATGTTGTTCTCTCATGGCACAATGATCACTGTGAATAA 1302 0.5131 MEPNITNPSPPLPSPSPSAVTILGKYQLIRLLGRGSFAKVYQAKSLTDNSIVAVKIIDKSKTDAAMEPRILREVDAMRRLHHHPHILKIHEVLATKTKIYLIVDFAPGGELFSKITRKGKFTEPIARRYFQQLVSALCFCHKNGVIHRDLKPQNLLLDHEGNLKVSDFGLSALPEQLKNGLLHTACGTPAYTAPEILFRRGYDGSKADAWSCGLILFVLLAGYLPFSDSNIPEMCRKISRRDYKFPDWISRPARFVIYRLLDPNPKNRMGLEALYGNSWFKKSLQARPDDSLFGPGQARPGKVERVGSGVNAFDIISMSSGLDLTGLFETTSDCNRREKRFTSNASTVVVEEKVKEVGGILGFKVEIGKDGVIGLGKGKVVIVVEVFEIVPDELLMVNVKVMNGGFEFDELHWGEWKSGLQDVVLSWHNDHCE 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1527 433 FunFam Non-specific serine/threonine protein kinase 19 110 - -
Mibi13g1527 433 FunFam Non-specific serine/threonine protein kinase 17 306 - -
Mibi13g1527 433 ProSitePatterns Protein kinases ATP-binding region signature. 32 55 IPR017441 GO:0005524
Mibi13g1527 433 SUPERFAMILY Protein kinase-like (PK-like) 22 286 IPR011009 -
Mibi13g1527 433 Gene3D Transferase(Phosphotransferase) domain 1 18 296 - -
Mibi13g1527 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Mibi13g1527 433 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Mibi13g1527 433 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 20 400 - -
Mibi13g1527 433 Gene3D Kinase associated domain 1, KA1 307 425 - -
Mibi13g1527 433 Pfam NAF domain 310 366 IPR004041 GO:0007165
Mibi13g1527 433 SMART serkin_6 26 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g1527 433 ProSiteProfiles Protein kinase domain profile. 26 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g1527 433 CDD CIPK_C 311 421 - -
Mibi13g1527 433 Pfam Protein kinase domain 26 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1527 Mibi-ChrMibi13 24077657 24078958 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1527 3 430 Miscellaneous Gene Families AT3G23000 56.422 6.88e-167 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mibi13g1527 Pkinase 6.4e-68 CL0016