Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1502 ATGGCTATGGAATTTGTGACTAATTTGGAGACAATACAGACACTTCTGAGTGGCCCAAAGAATGTTAGCAAGCCCACCAAAAAATGGCAATCTGCATTTGTTAGTATATATTGTTACAGAACCCTCTTGTCTCACTTCAAATCCCCTTCCCTTCCCTCCACCACCACAATCATCAACAAGAACAATAAGCCTAACAAGATAGCACCTTCTTCCCCCTACTCTGTTATTGATGTAGACACAGATGATTCTTTTTCTGTTTCCCAAACTACCCTTACAAATCTCGTCAAGGAGAAAAATGTGGAAACTCTTCAAAATCTTGGTGGGGTCCATGGTGTGGCCTCTGCTCTTAAAACCAACATTGAAAATGGAGTCAACGGTAGTCCCAATGATTTCGTGCGACGTCACAACGCGTTTGGTTCAAACACATACCCAAAGCCACCAACGAGAGGTTTCTTATTTTTTGTGGTTGAAAACTTGAAGGATCCCACCATTCTTATTTTCTTGGTTTGTGCTGCTATGTCTCTTGGCTTTGGCATCAAGAAGAAAGGACTCAAGGAAGGTTGGTATGAAGGTGGAAGCATCTTCGATGCTGTTTTTCTCGTCACTGCTGTTTCTTCCATCAATAACTTCAGACACAACAGGCATTTCGACAAGTTGTTCCATCATAGCAATAACATTCAGGTGGACGTCGTACGAGGTGGTTGCCGGCAACATATTTCGATATACGACGTCGTGGTGGGCCATGTCGTGTGGCTCAAGATCGGAGACCAAGTTCCTGCTGATGGCTTGTTCTTTGGAGGCCATTCTCTACATGTTGATGAGTCAAACATGACAGACAACAACCAGGAAGAAACCCCTTTGCAACAACGTCTTAATAAGCTTGCTTCAACGCTAGGAACGGTTGGTTTGGCTGTAGCTTTTATTGTTGTGGTTGCGATTCCGGAAGGTCTTTCTTTGGTTGTGACTTTGACACTTACTTATTCCACAAAGAAGATGATGGATGATATGGCTATGGTTAGGAAGCTTTCTGCCTGCGAGGCTATGGGGTCTGCTACAATCATTTGTACTCATAAGACTGGTTCACTCACACTTAATCAAATGAAGGCTGTTCATGATTTGAAAATGAACATGGATGAATCAAGGGAGGATTCTACCATCCTTCATATGGAAGCCTTCAATTCAAAGAGGAAAAGATGTGGGGTTTTGATTAGAAGTAAATCCAACGACAGAATCCATGCACATTGGAAAGGGGCAGCTGAGATGGATTGCCAAAAGGCAGGAATAAGTGTCAAAATGATCACAGGAGACAATGTTTTTACAGCCAAAGCCATAGCCACAAAATGTGGCATCCTCCTACCTAATCAAGACCCAACTGAAGCAGTAATTGAAGGAGATATATTCCGAAACTTGTCTCCTAAGGAAAGACTAAAGATAGTGGAGAAAATCAGTGTGATGGCTCGATCCTCTCCCTATGAAAAGCTCTTAATGGTTCAATGCCTCAAAAAGAAAGGTCACATAGTTGTAGTCACAGGAGATGGCACCAAAGACGCTCTAACATTAAAGGAAGCTGATATAGGACTTTCCATGGGGATTCAAGGCGTTGAAGTTGCAAATGAAAGCCCAGATATAATTATAATGGATGATAACTTTGCCTCAGTTGTTACAGTTCTTAAGTGGGGAAGATGTGTTTACGATAACATCCAGAAGTTCATTCAATTTCAACTCACAGTAAATGTAGCTGCATTTGCAATTAACTTTGTGGCTGCAGTATCATCAAGAGAAGTGCCATTAACAGGTGGTCAACTATTGTGGGTGAACCTTATAATGGAAACTTTGGGTGCTTTAGCTCTAGCAATTGATGAGCCTACAGAGGATTTATTGGAGAACCCACCGGTGGGTAGAAATGAGCCTTTGATAACCAACATTATGTGGAGAAATCTCTTAGCCCAAGCTTTCTATCAAATCACAATTCTATTGACCTTACTTTTCAAGGGTGAGGGTATATTTAGGGTTAGTTCAAGGGTGAATGACACTTTGATTTTCAACACATTTATGTATGTTATGCCAAGTGTTTAA 2076 0.4147 MAMEFVTNLETIQTLLSGPKNVSKPTKKWQSAFVSIYCYRTLLSHFKSPSLPSTTTIINKNNKPNKIAPSSPYSVIDVDTDDSFSVSQTTLTNLVKEKNVETLQNLGGVHGVASALKTNIENGVNGSPNDFVRRHNAFGSNTYPKPPTRGFLFFVVENLKDPTILIFLVCAAMSLGFGIKKKGLKEGWYEGGSIFDAVFLVTAVSSINNFRHNRHFDKLFHHSNNIQVDVVRGGCRQHISIYDVVVGHVVWLKIGDQVPADGLFFGGHSLHVDESNMTDNNQEETPLQQRLNKLASTLGTVGLAVAFIVVVAIPEGLSLVVTLTLTYSTKKMMDDMAMVRKLSACEAMGSATIICTHKTGSLTLNQMKAVHDLKMNMDESREDSTILHMEAFNSKRKRCGVLIRSKSNDRIHAHWKGAAEMDCQKAGISVKMITGDNVFTAKAIATKCGILLPNQDPTEAVIEGDIFRNLSPKERLKIVEKISVMARSSPYEKLLMVQCLKKKGHIVVVTGDGTKDALTLKEADIGLSMGIQGVEVANESPDIIIMDDNFASVVTVLKWGRCVYDNIQKFIQFQLTVNVAAFAINFVAAVSSREVPLTGGQLLWVNLIMETLGALALAIDEPTEDLLENPPVGRNEPLITNIMWRNLLAQAFYQITILLTLLFKGEGIFRVSSRVNDTLIFNTFMYVMPSV 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1502 691 Gene3D - 365 381 IPR023299 GO:0000166
Mibi13g1502 691 PANTHER CATION TRANSPORTING ATPASE 308 370 - -
Mibi13g1502 691 SUPERFAMILY Calcium ATPase, transmembrane domain M 107 686 IPR023298 -
Mibi13g1502 691 PRINTS P-type cation-transporting ATPase superfamily signature 510 529 - -
Mibi13g1502 691 PRINTS P-type cation-transporting ATPase superfamily signature 534 546 - -
Mibi13g1502 691 PRINTS P-type cation-transporting ATPase superfamily signature 355 369 - -
Mibi13g1502 691 Pfam haloacid dehalogenase-like hydrolase 424 524 - -
Mibi13g1502 691 Gene3D - 556 659 - -
Mibi13g1502 691 Gene3D - 157 212 - -
Mibi13g1502 691 Gene3D - 301 351 - -
Mibi13g1502 691 Gene3D - 129 278 - -
Mibi13g1502 691 SUPERFAMILY HAD-like 422 614 IPR036412 -
Mibi13g1502 691 Pfam E1-E2 ATPase 226 278 - -
Mibi13g1502 691 Gene3D - 422 555 IPR023214 -
Mibi13g1502 691 Gene3D - 352 364 IPR023214 -
Mibi13g1502 691 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 477 590 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi13g1502 691 Pfam Cation transporting ATPase, C-terminus 595 686 IPR006068 -
Mibi13g1502 691 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 368 421 IPR023299 GO:0000166
Mibi13g1502 691 Pfam Cation transport ATPase (P-type) 368 421 - -
Mibi13g1502 691 SUPERFAMILY Calcium ATPase, transduction domain A 225 278 IPR008250 -
Mibi13g1502 691 Pfam Cation transporter/ATPase, N-terminus 107 174 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1502 Mibi-ChrMibi13 23147646 23150651 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1502 422 685 Primary Pumps ATPases AT3G22910 71.321 2.24e-126 398