Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1500 ATGCAATGGGCCGTGGCACTCCGATCAAAACGATTTAAGAAAAACAAAAGAACCCTCTTGTCTCACTTCAAGTCCCCTTCCCTTCCCTCCACCACCACAATCATCAACAAGAACAAAAAGCCTACAAAGATATCACCTTCTTCCTCCTACACTGTCATTGATTTAGACACAGACCCTTCTTTTTCTGTTTCCCAAACGACCCTTACAAATCTTGTTAAGGAGAAAAATGTAGAAACCTTGCAAAATCTTGGTGGGGTCCATGGCGTGGCCTCTGCCCTTCAAACCAACATTGAAAATGGAGTCAAAGGCAGTGATGATGACAATGATGACGATCTCGGCGCAACACGTTTGGACCCCACCATTCTGATTCTCTTAGTATGTGCTGCTCTGTCTCTTGGTTTTGGCATCGAAGAGAATGGAATCGAAGAAGGGTGGTATGAAGGTGGAAGCATCTTTGTTGCTGTTTTTCTCGTCATTGCTGTGTCCTCCATCAGTAACTTCAGACAAAGCAGGCAATTCGACAAGTTGTCACAAGTTAGCAATAACATTCAGCTGAAGATTGGAGACCAAGTTCCTGCTGATGGATTGTTCTTGGAAGGCCATTCTCTTCAAGTTGATGAGTCAAGTATGACAGGCGAGAGCGACCACGTTGAGATCAATGGAAACAAAAATCCGTTTTTGCTTACTTCTGCTATTGGAAAGGTTGGTTTGGCTGTGGCTTTTCTTGTTCTTCTTGTTATGTTGATTCGCTACTTTACTGGGAACACAAGGGATGAGAATGGGAATAAAGAGTACAATGGTAGCAGAACAAAGTTTAATGGCATCATGAATGGAGTTGTGCACATTGTTTCTGCTGCTGTTACTATTGTTGTGGTTGCCATCCCAGAGGGGCTTCCTTTGGCTGTTACTTTGACACTTGCTTATTCCATGAAGAAGATGATGTCTGATATGGCTATGGTGAGGAAGCTCTTTGCTTGTGAAACTATGGGGTCTGCTACAACCATTTGCACTGATAAGACTGGCACACTCACGCTTAATCAGATGAAGGTGACCAAGTTCTGGCTGGGACAACAACTAATGGAAGAGAAACCTCATGAATATTCATCAATTCATTCATATGCTATTCGACTGATCAAAGAAGGCGTTGCCCATAACACTACAGGAAGTGTTTTCAAGTCTAAATCATTAGATTCTGGATATGAGTTTTCAGGTAGTCCCACAGAAAAGGCCATTCTTTCATGGGCTGTTCTTGATTTGGACATGCACATGGAGGAGTTGACTCAAAGTTGTACCATACTACATGTGGAAGCCTTCAATTCAAAGAAGAGAAGTGGGGTTTTGATTAGAAGGAAAGCAGACAATAAAATCCTTGCACATTGGAAAGGAGCAGCTGAGATGGTACTGAGTCTATGTTCAAAGTACTATGATGCTTCTGGCAATGTAAAAGATCTTGACAATGGCAAGAGATCGGTATTTGAGCAAATCATTGAAGGAATGGCTGCGAGCAGCCTTAGGTGTATTGCTTTTGCACATGTAGAAGTAGCAAAAGAAGATTTAAAAGAAGAAGGCCTCACCCTCTTAGGAATTGTTGGTATTAAGGATCCATGTCGTCCTGGTGTGAAGAAAGCCGTACAAGATTGCCAAAAAGCAGGAGTAACTGTCAAAATGATCACAGGAGACAACATTTTCACAGCTAAAGCCATAGCAACAGAATGTGGCATCCTCCTACCTAATCAAGATACAATTGAAGCAGTCATTGAGGGACAGGTATTTCGAAACCTGTTTGATGAGGAAAGACTAAAGAGAGTCGAGAAAATTTGTGTGATGGCACGATCCTCCCCTTTTGACAAGCTTCTCATGGTTCAATGCCTCAAACATAAAGGTCATGTAGTTGCAGTCACAGGAGATGGCACCAATGACGCACCAGCATTAAAGGAAGCTGATATAGGACTTTCCATGGGGATTCAAGGCACTGAGGTTGCAAAAGAAAGCTCAGATATAGTAATCTTAGATGATAATTTCGCGTCGGTTGCCACAGTTCTCAAGTGGGGAAGATGTGTCTATAACAACATTCAAAAGTTCATTCAGTTTCAACTAACTGTCAATGTTGCAGCTCTTGCAATTAACTTTGTGGCTGCAGTATCAGCAGGAAAAGTGCCATTAACAGCAGTTCAACTATTGTGGGTGAACCTCATAATGGACACCTTGGGTGCTTTGGCTCTTGCAACAGAGAAGCCTACAAGGGAGCTTTTGGATAAATCACCAGTGGGAAGAACTGAGCCCCTTATCACCAACATCATGTGGAGAAATCTGTTAGCCCAAGCTTTATACCAGATCACTATTCTATTGACATTACAATTCAAGGGTAAAACAATATTTGGGGTGACTTCAAAGGTGAATGACACTTTGATTTTCAACACATTTGTGTTATGTCAAGTGTTCAATGAGTTCAATGCAAGGAAGATGGAGAAGAAGAATGTGTTCCAGGGGATTCATAAGAACAAGTTGTTTATGGGGGTCATAGGAATGACCATTGTTCTTCAGGTGCTAATGGTTGAGTTTCTAAAGAAATTTGCAAATACCGAGAGGCTGAATTGGGGGCAGTGGGGAGCATGCATTTTAATGGCAGCTATTTCTTGGCCTATTGGTTGGATTGTGAAGTTCATCCCTGTGTCGGAGAGACCATTGCTCAGTTTCTTGAACATGAAGAAGAAATGA 2718 0.4209 MQWAVALRSKRFKKNKRTLLSHFKSPSLPSTTTIINKNKKPTKISPSSSYTVIDLDTDPSFSVSQTTLTNLVKEKNVETLQNLGGVHGVASALQTNIENGVKGSDDDNDDDLGATRLDPTILILLVCAALSLGFGIEENGIEEGWYEGGSIFVAVFLVIAVSSISNFRQSRQFDKLSQVSNNIQLKIGDQVPADGLFLEGHSLQVDESSMTGESDHVEINGNKNPFLLTSAIGKVGLAVAFLVLLVMLIRYFTGNTRDENGNKEYNGSRTKFNGIMNGVVHIVSAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMSDMAMVRKLFACETMGSATTICTDKTGTLTLNQMKVTKFWLGQQLMEEKPHEYSSIHSYAIRLIKEGVAHNTTGSVFKSKSLDSGYEFSGSPTEKAILSWAVLDLDMHMEELTQSCTILHVEAFNSKKRSGVLIRRKADNKILAHWKGAAEMVLSLCSKYYDASGNVKDLDNGKRSVFEQIIEGMAASSLRCIAFAHVEVAKEDLKEEGLTLLGIVGIKDPCRPGVKKAVQDCQKAGVTVKMITGDNIFTAKAIATECGILLPNQDTIEAVIEGQVFRNLFDEERLKRVEKICVMARSSPFDKLLMVQCLKHKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQLTVNVAALAINFVAAVSAGKVPLTAVQLLWVNLIMDTLGALALATEKPTRELLDKSPVGRTEPLITNIMWRNLLAQALYQITILLTLQFKGKTIFGVTSKVNDTLIFNTFVLCQVFNEFNARKMEKKNVFQGIHKNKLFMGVIGMTIVLQVLMVEFLKKFANTERLNWGQWGACILMAAISWPIGWIVKFIPVSERPLLSFLNMKKK 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1500 905 ProSitePatterns E1-E2 ATPases phosphorylation site. 338 344 IPR018303 -
Mibi13g1500 905 PANTHER CATION TRANSPORTING ATPASE 45 229 - -
Mibi13g1500 905 Pfam haloacid dehalogenase-like hydrolase 333 648 - -
Mibi13g1500 905 FunFam Calcium-transporting ATPase 529 679 - -
Mibi13g1500 905 Gene3D - 333 679 IPR023214 -
Mibi13g1500 905 Gene3D - 346 535 IPR023299 GO:0000166
Mibi13g1500 905 PRINTS P-type cation-transporting ATPase superfamily signature 336 350 - -
Mibi13g1500 905 PRINTS P-type cation-transporting ATPase superfamily signature 634 653 - -
Mibi13g1500 905 PRINTS P-type cation-transporting ATPase superfamily signature 528 539 - -
Mibi13g1500 905 PRINTS P-type cation-transporting ATPase superfamily signature 206 220 - -
Mibi13g1500 905 PRINTS P-type cation-transporting ATPase superfamily signature 658 670 - -
Mibi13g1500 905 PRINTS P-type cation-transporting ATPase superfamily signature 550 560 - -
Mibi13g1500 905 SUPERFAMILY Calcium ATPase, transmembrane domain M 85 891 IPR023298 -
Mibi13g1500 905 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 228 891 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Mibi13g1500 905 SFLD p-type atpase 318 687 IPR044492 -
Mibi13g1500 905 Pfam Cation transporting ATPase, C-terminus 719 889 IPR006068 -
Mibi13g1500 905 FunFam Calcium-transporting ATPase 651 893 - -
Mibi13g1500 905 Gene3D - 272 889 - -
Mibi13g1500 905 PRINTS H+-transporting ATPase (proton pump) signature 492 510 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi13g1500 905 PRINTS H+-transporting ATPase (proton pump) signature 666 691 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi13g1500 905 PRINTS H+-transporting ATPase (proton pump) signature 634 650 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi13g1500 905 SUPERFAMILY HAD-like 334 739 IPR036412 -
Mibi13g1500 905 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 277 369 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi13g1500 905 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 606 715 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi13g1500 905 Gene3D - 178 228 - -
Mibi13g1500 905 FunFam Calcium-transporting ATPase 346 535 - -
Mibi13g1500 905 SUPERFAMILY Calcium ATPase, transduction domain A 182 221 IPR008250 -
Mibi13g1500 905 SFLD Haloacid Dehalogenase 318 687 - -
Mibi13g1500 905 Pfam E1-E2 ATPase 231 314 - -
Mibi13g1500 905 Pfam E1-E2 ATPase 183 220 - -
Mibi13g1500 905 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 342 540 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1500 Mibi-ChrMibi13 23048007 23055395 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1500 41 900 Primary Pumps ATPases AT3G63380 62.795 0.0 1122