Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1499 ATGGCTATGTCATTTGTGAATAATTTGGAGACGATACAGACACTTCTGAGTGGCCCAAAGAATGTTAGCAAACCCACCAAAAAATGGCAATCTGCATTTGTTAGTATATATTGTTACAGAACCCTCTTGTCTCACTTCAAATTCCCTTCCCTTCCCTCCACCACCACCACCACAATCATCAACAAGAACAGTAAGCCTAAAAAGATATCACATTCTTCCTCCTACTCTGTCATTGATATAGACACAGATCATTCTTTTTCTGTTTCCCAAACCACCCTCACAAATCTCGTGAAGGAGAAAAATGTAGAAACCCTGCAAAATCTTTGTGGGGTACATGGGGTGGCCTCTGCTCTTAAAACCAACATTGAAAATGGAGTCAAAGCCGGTGATGCAGAAGACCACGACAATAATGACAATCTCAGTGACGTGATAAGGCGGCGCGAAGTGTTTGGTTCAAACACATATCCAAAACCACCTACCAGAGGTTTCTTTCACTTTGTCATTGAAGGATTCAAGGACCCCACCATTCTGATTCTCTTAGTATGTGCTGCTCTGTCTCTTGGCTTTGGCATTAAGGAGAATGGAATTAAAGAAGGATGGTATGAAGGTGGAAGCATATTTATTGCTGTTTTTCTTGTCATTGCTGTCTCTTCCATCAGTAATTTCAGACAAAGCAGGCAATTCGACAAATTGTCACAGGTCAGCAACAACATTCAGGTGGATGTGGTTCGAGGTGGTCGCAGGCGACATGTTTCTATATATGACATAGTCGTTGGTGATGTTGTGTGGCTGAAGATTGGAGACCAAGTTCCTGCTGATGGCTTGTTCTTAGAAGGACATTCTCTTCAAGTTGATGAATCAAGCATGACAGGTGAGAGCGACCACGCTGAGATCAATGGTGACAAAAACCCATTCTTGTTTTCTGGCACTAAGGTTGTTAATGGGTTTGCCAAAATGATTGTTACTTCTGTTGGCATAAACACCACTTGGGGTCAAATGATGAGTACCATAAGTAGAGATAATAATGAACAAACTCCTTTGCAACAACGTCTCAATAGGCTTACTTCTGCTATTGGAAAGGTTGGTCTGGCTGTGGCTTTTCTTGTTCTTCTTGTTATGTTGGTTCGCTACTTCACTGGGAACACAAGGGATGAGAATGGGAATAAAGAGTACAATGGAAGCAGAACAAAGTTTAATGGCATCATGAATGGAGTTGTGCACATTGTTTCTGCTGCTGTTACTATTGTTGTGGTTGCCATCCCAGAGGGGCTTCCTCTAGCTGTGACTTTGACACTTGCTTATTCCATGAAGAAGATGATGGCTGATATGGCTATGGTTAGGAAGCTTTCTGCTTGTGAGACTATGGGGTCTGCTACAACCATTTGCACTGATAAGACTGGCACACTCACGCTTAATCAAATGAAGGTGACCAAGTTCTGGCTTGGACAACAACCTATGGAAGAGATAGATCATGAATATTCATCAGCTCATTCAGATGTTATTCAATTGATCAAAGAAGGGGTTGCCCTTAACACTACAGGTAGTGTTTTCAAGTCTAACTCATTAGATTCTGGATATGAGTTTTCAGGTAGTCCCACAGAAAAGGCCATTCTTTCATGGGCTGTTCTTGATTTGGACATGCACATGGAGGAGTTGACTCAAAGTCGTACCATCCTTCATGTGGAAGCCTTCAATTCAAAGAAGAAGAGAAGTGGGGTTTTGATTAGAAGGAAAGCAGACACTAAGATCCTTGCACATTGGAAAGGAGCAGCTGAGATGATACTGAGTCTATGTTCAAAGTACTATGATGCTTCTGGCAAATTAAAAGATCTTGACAATGGCAAGAGATTGGTATTTGAGAAAATCATTGAAGGAATGGCAGCGAGCAGCCTTAGGTGTATTGCTTTTGCCCATGCAGAAGTAGCAGAAGAAGATTTAAAAGAAGAAGGCCTCACCCTCTTAGGATTTGTTGGTATTATGGATCCATGTCGTCCCAATGTGAAGAAAGCCGTACAAGATTGCCAAAAAGCAGGAGTAACTGTCAAAATGATCACAGGAGACAACGTTTTCACAGCTAAAGCCATAGCAACAGAATGTGGCATCCTCGTACCTAATCAAGATACAATTGAAGCAGTCATTGAGGGACAGGTATTTCGAAACCTATCTGATGAGGAAAGACTAAAGAGAGTCGAGAAAATTTGTGTGATGGCACGATCCTCCCCTTTTGACAAGCTCCTCATGGTTCAATGCCTCAAACAGAAAGGTCATGTGGTTGCAGTCACAGGAGATGGCACCAATGACGCACCAGCATTAAAGGAAGCTGATATAGGACTTTCCATGGGGATTCAAGGCACTGAGGTTGCAAAAGAAAGCTCAGATATAGTAATCTTAGATGATAATTTTGCGTCGGTTGTCACAGTTCTCAAGTGGGGAAGATGTGTCTATAACAACATTCAAAAGTTCATTCAGTTTCAACTAACTGTCAATGTTGCAGCTCTTGTAATTAACTTTGTGGCTGCAGTATCAGCAGGAAAAGTGCCATTAACAGCAGTTCAACTATTGTGGGTGAACCTCATAATGGACACTTTGGGTGCTTTGGCTCTTGCAACAGAGAAGCCTACAAGGGAGCTATTGGATAAATCACCAGTGGGAAGAACTGAACCCCTTATCACCAACATCATGTGGAGAAATCTTTTAGCCCAATCTTTATACCAGATCATTATTCTATTGACATTACAGTTCAAGGGTAAAGCAATATTTAGGGTGAGTTCAAAGGTGAATGATACTTTGATTTTCAACACATTTGTGTTATGTCAAGTGTTCAATGAGTTCAATGCAAGGAAGCTGGAGAAGAAGAATGTGTTCCAGGGGATTCACAAGAACAAGTTGTTTATGGGGATCATAGGAATGACTGTTGTTCTTCAAGTGTTGATGGTGGAGTTTTTAAAGAAATTTGCAGACACTGAGAGGTTGAATTGGGGGCAGTGGGGTGCATGCATTTTAATGGCAGCTATTTCATGGCCTATTGGTTGGATAGTGAAGTTCATCCCTGTGCCAGAGAGACCATTACTCAATTTGTTATATGTCTTCCTTCAAGCAGTTCTTCTTCAGAGAGCTATGGCTTTTAGTTTGGCTTTTGCTGCCACCGAATGGCCCACTGTTAAGTTTTCACATGATAGAAGTAACAGTATAGGAAGATTGAAACCACAAAACAGAGGTCAGCGGTGGCTATTTCCAGGTGGTAGGGACAGCAAGAGAGCAAACGACGGCAAGACTGGAGAAGAGAGTTGA 3291 0.4184 MAMSFVNNLETIQTLLSGPKNVSKPTKKWQSAFVSIYCYRTLLSHFKFPSLPSTTTTTIINKNSKPKKISHSSSYSVIDIDTDHSFSVSQTTLTNLVKEKNVETLQNLCGVHGVASALKTNIENGVKAGDAEDHDNNDNLSDVIRRREVFGSNTYPKPPTRGFFHFVIEGFKDPTILILLVCAALSLGFGIKENGIKEGWYEGGSIFIAVFLVIAVSSISNFRQSRQFDKLSQVSNNIQVDVVRGGRRRHVSIYDIVVGDVVWLKIGDQVPADGLFLEGHSLQVDESSMTGESDHAEINGDKNPFLFSGTKVVNGFAKMIVTSVGINTTWGQMMSTISRDNNEQTPLQQRLNRLTSAIGKVGLAVAFLVLLVMLVRYFTGNTRDENGNKEYNGSRTKFNGIMNGVVHIVSAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADMAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKFWLGQQPMEEIDHEYSSAHSDVIQLIKEGVALNTTGSVFKSNSLDSGYEFSGSPTEKAILSWAVLDLDMHMEELTQSRTILHVEAFNSKKKRSGVLIRRKADTKILAHWKGAAEMILSLCSKYYDASGKLKDLDNGKRLVFEKIIEGMAASSLRCIAFAHAEVAEEDLKEEGLTLLGFVGIMDPCRPNVKKAVQDCQKAGVTVKMITGDNVFTAKAIATECGILVPNQDTIEAVIEGQVFRNLSDEERLKRVEKICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVVTVLKWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSAGKVPLTAVQLLWVNLIMDTLGALALATEKPTRELLDKSPVGRTEPLITNIMWRNLLAQSLYQIIILLTLQFKGKAIFRVSSKVNDTLIFNTFVLCQVFNEFNARKLEKKNVFQGIHKNKLFMGIIGMTVVLQVLMVEFLKKFADTERLNWGQWGACILMAAISWPIGWIVKFIPVPERPLLNLLYVFLQAVLLQRAMAFSLAFAATEWPTVKFSHDRSNSIGRLKPQNRGQRWLFPGGRDSKRANDGKTGEES 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1499 1096 FunFam Calcium-transporting ATPase 472 662 - -
Mibi13g1499 1096 Gene3D - 142 338 - -
Mibi13g1499 1096 MobiDBLite consensus disorder prediction 1082 1096 - -
Mibi13g1499 1096 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 733 842 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi13g1499 1096 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 403 484 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi13g1499 1096 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 206 379 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi13g1499 1096 FunFam Calcium-transporting ATPase 211 338 - -
Mibi13g1499 1096 ProSitePatterns E1-E2 ATPases phosphorylation site. 464 470 IPR018303 -
Mibi13g1499 1096 Pfam E1-E2 ATPase 239 440 - -
Mibi13g1499 1096 CDD P-type_ATPase_Ca_PMCA-like 145 894 - -
Mibi13g1499 1096 Gene3D - 459 806 IPR023214 -
Mibi13g1499 1096 SUPERFAMILY Calcium ATPase, transmembrane domain M 110 1018 IPR023298 -
Mibi13g1499 1096 Gene3D - 169 1016 - -
Mibi13g1499 1096 MobiDBLite consensus disorder prediction 1060 1096 - -
Mibi13g1499 1096 PRINTS P-type cation-transporting ATPase superfamily signature 655 666 - -
Mibi13g1499 1096 PRINTS P-type cation-transporting ATPase superfamily signature 285 299 - -
Mibi13g1499 1096 PRINTS P-type cation-transporting ATPase superfamily signature 677 687 - -
Mibi13g1499 1096 PRINTS P-type cation-transporting ATPase superfamily signature 462 476 - -
Mibi13g1499 1096 PRINTS P-type cation-transporting ATPase superfamily signature 785 797 - -
Mibi13g1499 1096 PRINTS P-type cation-transporting ATPase superfamily signature 761 780 - -
Mibi13g1499 1096 SMART Cation_ATPase_N_a_2 110 191 IPR004014 -
Mibi13g1499 1096 SUPERFAMILY Calcium ATPase, transduction domain A 237 336 IPR008250 -
Mibi13g1499 1096 FunFam Calcium-transporting ATPase 778 1020 - -
Mibi13g1499 1096 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 468 667 IPR023299 GO:0000166
Mibi13g1499 1096 SFLD p-type atpase 444 814 IPR044492 -
Mibi13g1499 1096 SUPERFAMILY HAD-like 460 866 IPR036412 -
Mibi13g1499 1096 Pfam haloacid dehalogenase-like hydrolase 459 775 - -
Mibi13g1499 1096 Pfam Cation transporter/ATPase, N-terminus 110 186 IPR004014 -
Mibi13g1499 1096 SFLD C1.7: P-type atpase like 444 814 - -
Mibi13g1499 1096 PANTHER CATION TRANSPORTING ATPASE 71 1019 - -
Mibi13g1499 1096 FunFam Calcium-transporting ATPase 656 806 - -
Mibi13g1499 1096 Gene3D - 472 662 IPR023299 GO:0000166
Mibi13g1499 1096 Pfam Cation transporting ATPase, C-terminus 846 1016 IPR006068 -
Mibi13g1499 1096 PRINTS H+-transporting ATPase (proton pump) signature 793 818 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi13g1499 1096 PRINTS H+-transporting ATPase (proton pump) signature 619 637 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi13g1499 1096 PRINTS H+-transporting ATPase (proton pump) signature 761 777 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi13g1499 1096 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 83 1018 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1499 Mibi-ChrMibi13 22965783 22969250 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1499 12 1027 Primary Pumps ATPases AT3G22910 67.480 0.0 1306