Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1498 ATGTCTATGCCCTTCCTCACCAATTTGGAGCGTATACAGAGACTTCTCAATTCCCCTCAAAATCTGAGCAAACCCAACAAACAATGGCATTCTGCTTTTGTCAACATCTATTGTTCTAGAGCGCTCTTCTCTCACTTCACTTCCTCTTTGCTTCCCACCTATAACAATAATACTTCCAAGATATCACCTTCTTCCTCCTACACTGTCATCGATATAGACAAAGATCATTCTTTTCCTGTTACCCAAAGCACCCTCACAAATCTTGTGAAGGAGAAAAATGTAGAAACCCTGCAACATCTTGGTGGGGTCCATGGTGTGGCCTCTGCTCTCAAAACCAACATTGAAAATGGAGTCAAAGCCGGTGATGAAGATGACGGTGACAATGATGACAATCTCAGTGACGTCATAAGACGGCGCAACGCGTTTGGTTCAAACACATACCCAAAACCACATGTAAAAGGTTTCTTTCATTTTGTGCTTGAAGGCTTTAAGGACCCCACCATTCTTATCCTCTTGGTATGTGCTGCTCTGTCTCTTGGTTTTGGCATCAAAGAGAATGGAATCAAAGAAGGATGGTATGAAGGTGGAAGCATATTTGTTGCTGTTTTTCTTGTCATTGCTGTCTCTTCCATTAGTAATTTCAGACAAAGCAGGCAATTTGACAAGTTGTCACAGGTCAGTAACAACATTCAGGTGGATGTTGTACGAGGTGGTCGCAGGCGACAGGTTTCTATATATGACATTGTCGTTGGTGATGTTGTGTGTCTGAAGATTGGAGACCAAGTTCCTGCTGATGGATTGTTCTTGGAAGGCCATTCTCTGCAAGTTGATGAGTCAAGCATGACTGGTGAGAGCGACCACGTTGACATTAATTCCCACAAAAACCCATTTTTGTTTTCTGGGACAAAAGTGGCTGATGGGTTTGCTAAAATGATTGTTACTTCTGTGGGTACAAACACAACATGGGGTGAAATGATGTGTACCATAAGTAGAGACAACAATGAACAAACTCCTCTGCAAGAACGTCTCAATAAGCTTACTTCTGCTATAGGGAAGGTTGGTTTGGGAGTGGCATTTCTGGTTCTTGTTGTTATGTTAATTCGGTACTTCACTGGGAATACAACAGATGAGAATGGGAATAAGGAGTTCAATGGAAGCAGCACAAAGTTTAATGACATAATGAATGGAGTTGTGGACATTGTTGCTGCTGCTGTTACTATTGTTGTGGTTGCCATTCCAGAAGGTCTTCCTTTGGCTGTCACTTTGACACTTGCTTATTCCATGAAGAAGATGATGGCTGACATGGCTATGGTTAGGAAGCTCTCTGCTTGTGAGACTATGGGGTCTGCTACGACGATTTGTACTGATAAGACCGGGACCCTCACATTGAATCAGATGAAGGTGACCAAGTTCTGGCTAGGAGAACAACCCATGGAAAAGAGACTTCATGAATCAATTGTTCATTCATATGTTATTCAATTGATCAAAGAAGGGGTTGCCCTTAACACTACAGGTAGTGTTTACAAGTCTAAACCATCAATAGATTCTGAATATGAGTTTTCAGGTAGCCCAACAGAAAAGGCCATTCTTTATTGGGCTGTTCATGATTTAGGCATGAACATGGAGGAGTTGTCTAAGAGTTCTGACGTCCTTCATGTGGAAGCCTTCAATTCAGAGAAGAAAAGAAGTGGGATTTTGATTAGAAGGATAGCAGACAACAAAGTCCATGCATATTGGAAAGGAGCAGCTGAGATGATATTGAGATTGTGTTCAAAGTACTATGATGCTTCTGGAAATGTTAAGGATCTTGATGATGACAAAAGGTTGGTGTTTGAGCAAATCATTCAAGGAATGGCGGCCAGCAGCCTTAGGTGTATTGCTTTTGCACATGCAGAAGTAGCTGAAGAAGATTTAAAAGAAGAAGGCCTCACCCTCTTAGGACTTGTTGGTATTAAGGATCCATGTCGCCCCGGTGTGAAGAAAGCCGTAGAAGAATGCCAAAATGCAGGAGTAAGTGTAAAAATGATCACAGGAGACAATGTTTTCACAGCCAAAGCCATAGCCACAGAATGCGGCATCCTCCGGCCTACTCAAGACACAACTAAAGCAGTCATCGAAGGAGAGGCATTTCGAAACTTGTCTGATGAGGAAAGACTAAAGAGAGTCGAAAAAATATGTGTTATGGCACGATCTTCCCCGTTCGACAAGCTTCTTATGGTTCAATGCCTTAAACAGAAAGGTCATGTAGTTGCAGTCACAGGAGATGGCACCAATGATGCACCTGCATTAAAGGAAGCTGATATAGGACTTTCTATGGGGATCCAAGGCACTGAAGTTGCAAAAGAAAGCTCTGATATAGTCATCTTGGATGATAATTTTGCCTCTGTTGCCACAGTTCTAAAGTGGGGAAGATGTGTCTATAACAACATCCAAAAGTTCATTCAGTTTCAGTTAACAGTAAATGTTGCAGCTCTTGCAATCAACTTTGTGGCAGCAATATCAGCAGGGAAAGTGCCATTAACAGCAGTTCAATTGTTGTGGGTGAACTTGATAATGGACACTTTGGGTGCTTTAGCTCTTGCAACAGAAAAACCTACAATGGAATTATTGAACAAACCACCAGTGGGAAGAATTGAGCCTCTCATCACCAACATCATGTGGAGAAATTTGTTAGCCCAAGCTTTATACCAGATCACAATTCTATTGACCTTACAGTTCAAGGGTAAAGCAATATTTGGTGTTAGTTCAAAGGTAAATGACACTTTGATTTTCAACACATTTGTGTTATGCCAAGTGTTTAATGAGTTCAATGCAAGGAAGCTGGAAAAGAAGAATGTGTTTCAGGGGATTCACAGGAACAAGTTATTTATGGGGATCATAGGAATGACCATTGTTCTTCAAGTGTTGATGGTGGAGTTTTTGAAGAAATTTGCAGATACTGAGAGGTTGAATTGGGGGCAGTGGGGTGCATGCATTTTAATGGCAGCTATTTCATGGCCTATTGGTTGGATAGTGAAGTTCATCCCTGTGCCAGAGAGACCATTGCTCAGTTTCCTGAACATGAAGAAGAAATGA 3075 0.4166 MSMPFLTNLERIQRLLNSPQNLSKPNKQWHSAFVNIYCSRALFSHFTSSLLPTYNNNTSKISPSSSYTVIDIDKDHSFPVTQSTLTNLVKEKNVETLQHLGGVHGVASALKTNIENGVKAGDEDDGDNDDNLSDVIRRRNAFGSNTYPKPHVKGFFHFVLEGFKDPTILILLVCAALSLGFGIKENGIKEGWYEGGSIFVAVFLVIAVSSISNFRQSRQFDKLSQVSNNIQVDVVRGGRRRQVSIYDIVVGDVVCLKIGDQVPADGLFLEGHSLQVDESSMTGESDHVDINSHKNPFLFSGTKVADGFAKMIVTSVGTNTTWGEMMCTISRDNNEQTPLQERLNKLTSAIGKVGLGVAFLVLVVMLIRYFTGNTTDENGNKEFNGSSTKFNDIMNGVVDIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADMAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKFWLGEQPMEKRLHESIVHSYVIQLIKEGVALNTTGSVYKSKPSIDSEYEFSGSPTEKAILYWAVHDLGMNMEELSKSSDVLHVEAFNSEKKRSGILIRRIADNKVHAYWKGAAEMILRLCSKYYDASGNVKDLDDDKRLVFEQIIQGMAASSLRCIAFAHAEVAEEDLKEEGLTLLGLVGIKDPCRPGVKKAVEECQNAGVSVKMITGDNVFTAKAIATECGILRPTQDTTKAVIEGEAFRNLSDEERLKRVEKICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQLTVNVAALAINFVAAISAGKVPLTAVQLLWVNLIMDTLGALALATEKPTMELLNKPPVGRIEPLITNIMWRNLLAQALYQITILLTLQFKGKAIFGVSSKVNDTLIFNTFVLCQVFNEFNARKLEKKNVFQGIHRNKLFMGIIGMTIVLQVLMVEFLKKFADTERLNWGQWGACILMAAISWPIGWIVKFIPVPERPLLSFLNMKKK 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1498 1024 SFLD Haloacid Dehalogenase 436 806 - -
Mibi13g1498 1024 Pfam Cation transporting ATPase, C-terminus 838 1008 IPR006068 -
Mibi13g1498 1024 Pfam haloacid dehalogenase-like hydrolase 451 767 - -
Mibi13g1498 1024 Gene3D - 451 798 IPR023214 -
Mibi13g1498 1024 FunFam Calcium-transporting ATPase 464 654 - -
Mibi13g1498 1024 Gene3D - 161 1008 - -
Mibi13g1498 1024 Gene3D - 464 654 IPR023299 GO:0000166
Mibi13g1498 1024 SFLD p-type atpase 436 806 IPR044492 -
Mibi13g1498 1024 CDD P-type_ATPase_Ca_PMCA-like 137 886 - -
Mibi13g1498 1024 Gene3D - 134 330 - -
Mibi13g1498 1024 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 725 834 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi13g1498 1024 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 198 371 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi13g1498 1024 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 544 703 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi13g1498 1024 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 395 489 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi13g1498 1024 FunFam Calcium-transporting ATPase 770 1012 - -
Mibi13g1498 1024 PRINTS H+-transporting ATPase (proton pump) signature 785 810 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi13g1498 1024 PRINTS H+-transporting ATPase (proton pump) signature 753 769 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi13g1498 1024 PRINTS H+-transporting ATPase (proton pump) signature 611 629 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi13g1498 1024 FunFam Calcium-transporting ATPase 202 330 - -
Mibi13g1498 1024 PANTHER CATION TRANSPORTING ATPASE 66 1010 - -
Mibi13g1498 1024 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 460 659 IPR023299 GO:0000166
Mibi13g1498 1024 PRINTS P-type cation-transporting ATPase superfamily signature 777 789 - -
Mibi13g1498 1024 PRINTS P-type cation-transporting ATPase superfamily signature 647 658 - -
Mibi13g1498 1024 PRINTS P-type cation-transporting ATPase superfamily signature 277 291 - -
Mibi13g1498 1024 PRINTS P-type cation-transporting ATPase superfamily signature 669 679 - -
Mibi13g1498 1024 PRINTS P-type cation-transporting ATPase superfamily signature 753 772 - -
Mibi13g1498 1024 PRINTS P-type cation-transporting ATPase superfamily signature 454 468 - -
Mibi13g1498 1024 SUPERFAMILY Calcium ATPase, transduction domain A 229 326 IPR008250 -
Mibi13g1498 1024 Pfam Cation transporter/ATPase, N-terminus 99 178 IPR004014 -
Mibi13g1498 1024 SUPERFAMILY HAD-like 452 858 IPR036412 -
Mibi13g1498 1024 ProSitePatterns E1-E2 ATPases phosphorylation site. 456 462 IPR018303 -
Mibi13g1498 1024 Pfam E1-E2 ATPase 231 432 - -
Mibi13g1498 1024 SMART Cation_ATPase_N_a_2 99 183 IPR004014 -
Mibi13g1498 1024 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 76 1010 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Mibi13g1498 1024 FunFam Calcium-transporting ATPase 648 798 - -
Mibi13g1498 1024 SUPERFAMILY Calcium ATPase, transmembrane domain M 99 1010 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1498 Mibi-ChrMibi13 22919308 22922382 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1498 12 1024 Primary Pumps ATPases AT3G22910 68.457 0.0 1326