Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1495 ATGTCTATAGCATTATTGCTACCCGATTTGGAGAAAGTACCGACGCTTCTGAGTGACCCAAAGGATGTGAGCAAACCAATCAAAAAATGGCAATCTTTATTTGTTAGTATATATTGTTACAGAACCCTCTTGTCTCACTTCCAATCCTCTTCGCTTTCCATCAACAAGAACAACAACCCTACAAGACGGCGCGATGTTTTTGGTTCAAACACATACCCAAAACCACCTATAAGAGGTTTCTTTCAATTTGTGATCGAAGGATTCAAGGACCCCACCATTGTCATTCTGTTGGCTTGTGCTGCTTTGTCTCTTGTCTTTGGTATCAAACAGAACGGAATTAAACAGGGATGGTATGAAGGTGGAAGCATATTTGTTGCTGTTTTCCTTGTCATTGCTGTTTCTTCCATTAGTAACTTCAGGCACAACAGACATTTCGACAATCTGTTCCAAGTTAGCAATAACATTCAGGTGGATGTTGTACGAGGCGGTCGCCGGCGACAGGTTTCAATATACGACGTTGTGGTCGGTGATGTTGTTTGGTTGAAGATTGGAGACCAAGTTCCTGCTGATGGCTTGTTCTTGGAAGGCTATTCTCTTCAAGTTGATGAGTCAAGCATGACTGGTGAGGGTGAGCATGTTGAGATTAATGGTGACAAAAACCCATTTTTGTTCTCTGGGTCTAAGGTTGCTGATGGGTTCGCCAAAATGGTTGTTACTTCTGTTGGCACAAACACAACATGGGGTGAGACGATGGGGACCATAAGCAGAGACAACAATGAAGAAACTCCTCTGCAACAACGCCTCAATGAGCTTGCTTCTGCTATAGGCAAGGTTGGTTTGGCTGTGGCTTTTATCGTTGCAGTTGCAATTCCGGAAGGGCTTCCTTTGGCTATGACTTTGACACTTGCTTATTCCACGAAGAAGATGATGGCTGACATGGCTTTGGTGAGAAAGCTCTCTGCCTGTGAGACTATGGGTTATGCTACGACAATCTGTACTGATAAGACTGGTACACTCACGCTTAATCGAATGAAGGTAACTAAGTTCTGGCTTGGACAGCAACCAATAGAAGAGACACCTCATGAATCATTAGTTCATTCAAATGTTCTTCAATTGATCAAAGAAGGGGTTGCCCTTAACACTACAGGTAGTGTTTACAAGTCTATCTCTTCAACAGATTCTGAGTATGAATTTTCAGGTAGTCCCACAGAAAAGGTCATTCTTTCTTGGGCTATTATTGATTTGGGCATGAACATGGAGGAGTTTTCACAAAGTTGTACAATCCTTCATGTGGAAGCCTTCAATCCAAAGAAGAAGAGAAGTGGGGTTTTGATTAGAAGGAAAGCAGACAATAAAATACTTGCACATTGGAAAGGAGCAGCTGAGATGGTACTAAGATTGTGCTCAAAGTACCATGATGCTTCTGGCAACATAAAGAATCTTGACAATGGCACAAAGTTGGTGTTTGAGCAAATCATTGAAGGAATAGCAGCAAGCAGCCTAAGGTGTATTGCGTTTGCACATACAGAAGTAGCTGGAGAAGAATATGATGGAGGAAACAAAAATGTAAAAGAAGAAGGACTCACACTCTTAGGACTTGTGGGTATTAAGGATCCATGTCGTGCAGGTGCAAAGAAAGCCGTACAAGATTGCCAAAACGCAGGAGTAAATGTCAAAATGATCACAGGAGACAATGTTTTCACAGCCAAAGTCATAGCCACAGAATGCGGCATCCTCCAGCCTAATCAAGACCCAACAGAAGCAGTCATTGAAGGAGAGGTCTTCCGAAACCTGTCTCTCAAGGAAAGATTAAAGAGAGTGGAGAAAATCAGTGTGATGGCACGATCATCTCCCTCTGAAAAGCTCCTCATGGTTCAATGCCTCAAAATGAAAGGACATGTAGTTGCAGTCACAGGTGATGGCACAAATGACGCTCCAGCATTAAAGGAAGCTGATATAGGGCTTTCCATGGGGATTCAAGGCATTGAAGTGGCAAATGAAAGCTCAGATGTAATTATCTTGGATGAGAACTTTGCCTCAGTTGTCACAGTTCTTAAGTGGGGAAGATGTGTTTACAACAATGTACAAAAGTTCATTCAGTTTCAACTAACAATAAATGTTGCTGCATTTGCAATTAACTTTGTGGCTGCAATATCATTAGGAGAAGTGCAATTAACAGCAGTTCAACTGTTGTGGGTGAACCTAATAATGGACACTTTGGGTGCTTTAGCTCTAGCAATAGAGAATCCTACGACAGAGTTATTGGATAAACCACCTGGAAAAGTGAGCAATGGGGAGGAAAGAGGGAAAACGTATGTGTTTGACTTCTTGTACGAGTTCCCAAATGTGGTCCTACACCATACATCTAGGAATATCATTGGATGTGCTGATTATCTGGCCCACAAAGGGCACTCGAGTGACAATGGGATAGTTTTGGGACCAAACGTGTCGAATGGTTTTGTTGCCATGCTTTTGGAAGATAAGCAGAGCTCCTGCTAA 2499 0.4238 MSIALLLPDLEKVPTLLSDPKDVSKPIKKWQSLFVSIYCYRTLLSHFQSSSLSINKNNNPTRRRDVFGSNTYPKPPIRGFFQFVIEGFKDPTIVILLACAALSLVFGIKQNGIKQGWYEGGSIFVAVFLVIAVSSISNFRHNRHFDNLFQVSNNIQVDVVRGGRRRQVSIYDVVVGDVVWLKIGDQVPADGLFLEGYSLQVDESSMTGEGEHVEINGDKNPFLFSGSKVADGFAKMVVTSVGTNTTWGETMGTISRDNNEETPLQQRLNELASAIGKVGLAVAFIVAVAIPEGLPLAMTLTLAYSTKKMMADMALVRKLSACETMGYATTICTDKTGTLTLNRMKVTKFWLGQQPIEETPHESLVHSNVLQLIKEGVALNTTGSVYKSISSTDSEYEFSGSPTEKVILSWAIIDLGMNMEEFSQSCTILHVEAFNPKKKRSGVLIRRKADNKILAHWKGAAEMVLRLCSKYHDASGNIKNLDNGTKLVFEQIIEGIAASSLRCIAFAHTEVAGEEYDGGNKNVKEEGLTLLGLVGIKDPCRAGAKKAVQDCQNAGVNVKMITGDNVFTAKVIATECGILQPNQDPTEAVIEGEVFRNLSLKERLKRVEKISVMARSSPSEKLLMVQCLKMKGHVVAVTGDGTNDAPALKEADIGLSMGIQGIEVANESSDVIILDENFASVVTVLKWGRCVYNNVQKFIQFQLTINVAAFAINFVAAISLGEVQLTAVQLLWVNLIMDTLGALALAIENPTTELLDKPPGKVSNGEERGKTYVFDFLYEFPNVVLHHTSRNIIGCADYLAHKGHSSDNGIVLGPNVSNGFVAMLLEDKQSSC 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1495 832 FunFam Calcium-transporting ATPase 342 539 - -
Mibi13g1495 832 PRINTS P-type cation-transporting ATPase superfamily signature 662 674 - -
Mibi13g1495 832 PRINTS P-type cation-transporting ATPase superfamily signature 638 657 - -
Mibi13g1495 832 PRINTS P-type cation-transporting ATPase superfamily signature 332 346 - -
Mibi13g1495 832 PRINTS P-type cation-transporting ATPase superfamily signature 554 564 - -
Mibi13g1495 832 PRINTS P-type cation-transporting ATPase superfamily signature 532 543 - -
Mibi13g1495 832 PRINTS P-type cation-transporting ATPase superfamily signature 202 216 - -
Mibi13g1495 832 Gene3D - 132 255 - -
Mibi13g1495 832 FunFam Calcium-transporting ATPase 127 255 - -
Mibi13g1495 832 Gene3D - 280 763 - -
Mibi13g1495 832 PANTHER CATION TRANSPORTING ATPASE 285 761 - -
Mibi13g1495 832 SUPERFAMILY Calcium ATPase, transmembrane domain M 61 764 IPR023298 -
Mibi13g1495 832 Pfam Cation transporting ATPase, C-terminus 725 761 IPR006068 -
Mibi13g1495 832 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 609 718 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi13g1495 832 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 123 370 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi13g1495 832 SFLD p-type atpase 314 691 IPR044492 -
Mibi13g1495 832 SUPERFAMILY HAD-like 330 743 IPR036412 -
Mibi13g1495 832 PRINTS H+-transporting ATPase (proton pump) signature 489 507 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi13g1495 832 PRINTS H+-transporting ATPase (proton pump) signature 670 695 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi13g1495 832 PRINTS H+-transporting ATPase (proton pump) signature 638 654 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi13g1495 832 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 338 543 IPR023299 GO:0000166
Mibi13g1495 832 Gene3D - 342 539 IPR023299 GO:0000166
Mibi13g1495 832 FunFam Plasma membrane calcium-transporting ATPase 2 537 683 - -
Mibi13g1495 832 SFLD C1.7: P-type atpase like 314 691 - -
Mibi13g1495 832 Pfam E1-E2 ATPase 156 288 - -
Mibi13g1495 832 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 285 759 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Mibi13g1495 832 ProSitePatterns E1-E2 ATPases phosphorylation site. 334 340 IPR018303 -
Mibi13g1495 832 SUPERFAMILY Calcium ATPase, transduction domain A 154 253 IPR008250 -
Mibi13g1495 832 Pfam haloacid dehalogenase-like hydrolase 329 652 - -
Mibi13g1495 832 Pfam Cation transporter/ATPase, N-terminus 62 103 IPR004014 -
Mibi13g1495 832 Gene3D - 329 683 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1495 Mibi-ChrMibi13 22785307 22788707 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1495 61 759 Primary Pumps ATPases AT3G63380 62.466 0.0 912