Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1494 ATGAAAGAAAGCTCAGAGCAACATCTTGTGATCAAAACCCATTTGCAAAACTCCATAAATCCATTAAAGAAATCACCCAAAACTGTCCAAAATGGAAAAGGCCCACCACCACCACCACCACCATCTCAAGAACCTCACAACACCAAACCCCAAAATAGCCATAACCATAGCCAACCTCCGAAGAATAGAGGAAGAAGAAGGAGCAGGGGTGGCCGGAAATCTGATCAAGGTGATGTTTTTATGAGACCAGCTTGTAGACCATGTACTGTGGCTAACAAACCGGTCTCAGAAAACCAGGGTCAGATTATGGTACCACGTAGTACTGTAAATGGGCCTGTTGTAAATGGCGGCAATAACTCTTGTGATGTTGTGATGGGGGGTTTTCCTACCTCAAGTAAATCTTTGAGCTTTGCTCCTAGGCCTGGATACGGACAAGTTGGGACAAAATGCATAGTGAAGGCTAACCATTTCTTTGCAGAGTTACCAGACAAGGACTTAAACCAGTATGATGTCACTATTACCCCAGAAGTGTCGTCTAGAACAGTGAACAGGGCCATCATGGCGGAACTCGTGAAACTGTATAAAGAGTCTGACTTGGGGATGAGACTCCCTGCGTATGATGGCAGAAAAGGTCTGTACACAGCAGGGGAGCTTCCCTTTGCTTGGAGAGAGTTTAAAATTAAGCTTGTAGATGAAGACGATGGAGTAAATGGTCCCAAAAGGGCAAGAGAATACAAAGTGGTGATTAAGTTTGTTGCTCGGGCAAACTTGCATCACTTGGGCCAGTTTCTAGCTGGTAAGCGTGCTGATGCTCCACAGGAGGCACTTCAGATTCTTGACATTGTATTAAGAGAGCTATCAAATAAGAGGTTTTGCCCCATCGGGAGGTCCTTCTTTTCACCCGATATTAGAACACCTCAAAGACTTGGAGAGGGATTGGAATCTTGGTGTGGATTTTACCAGAGCATAAGGCCTACTCAAATGGGCCTTTCCCTCAATATTGATATGGCCTCAGCTGCGTTTATTGAGCCTCTTCCTGTAGTGGAATTTGTTGGTCAGCTGTTGGGAAAAGATGTGCTGTCAAGGCCACTGTCTGATGCTGATCGTGTAAAGATTAAGAAAGCGCTTAGGGGAGTTAAAGTTGAAGTAACACACAGAGGGAGTGTACGGAGAAAATATCGTGTTTCAGGGTTAACTTCTCAACCAACGAGAGAACTTGTGTTTCCTGTTGATGACAAATCAACTATGAAATCAGTAGTTGAGTACTTCCAAGAGATGTATGGTTTCACTATTCAATTAACTCACCTACCTTGCCTTCAAGTAGGAAACCAAAAGAAGGCGAACTATTTGCCTATGGAGGCTTGCAAAATTGTTGAGGGGCAACGGTATACAAAAAGGTTGAATGAGAAGCAAATTACTGCTTTGCTGAAAGTTACTTGTCAGAGACCCCGTGACCGTGAAAATGACATTTTGCGGACCATTCAACATAATGCTTATGATCAAGATCCTTATGCAAAGGAGTTCGGGATTAAGATAAGCGAGAAATTGGCTTCTGTTGAAGCACGAATTCTCCCTGCCCCATGGTTGAAATATCATGACACTGGGAAAGAAAAGAACTGTTTACCCCAAGTGGGTCAGTGGAATATGATGAACAAGAAAATGATCAATGGGATGACTGTTAACCGGTGGGCATGCATAAATTTTTCACGAAATGTGCAAGATAGTGTTGCTCGCAGTTTTTGTAGTGAACTTGCTCAGATGTGTGAAATATCCGGCATGGAATTTAATCCAGAGCCTGTTATCCCAATATATAATGCCAAGCCTGAGCAGGTGGAGAAAGCTTTAAAGCATGTTTATCATGTTTCGATGAACAAAACCAAGGGAAAGGAATTAGAGCTTCTATTAGCAATATTGCCTGACAACAATGGCTCTCTTTATGGTGATCTCAAGCGAATTTGTGAAACTGACCTTGGCTTAATTTCTCAATGCTGCCTGACAAAGCATGTCTTTAAGATCACTAAGCAGTATCTGGCTAATGTGTCTCTGAAGATCAATGTTAAGATGGGAGGTAGAAACACTGTTCTTCTTGACGCCATAAGCTGCAGAATACCATTGGTTAGTGACATTCCAACCATAATATTTGGAGCAGATGTTACCCACCCTGAAAATGGAGAAGATTCCAGTCCCTCAATAGCAGCTGTAGTAGCTTCCCAAGACTGGCCTGAAGTGACTAAATATGCTGGTTTAGTGTGTGCTCAAGCTCACAGACAAGAACTCATTCAAGATTTGTACAAAACTTGGCATGATCCTGTTCGTGGCATGGTCAGTGGTGGCATGATCCGAGACTTGTTGATCTCCTTCAGAAAGGCAACAGGACAGAAGCCACTAAGGATTATATTCTACAGGGATGGCGTAAGTGAAGGGCAATTTTATCAAGTTCTACTTTATGAGTTAGATGCAATCCGGAAGGCTTGTGCTTCCTTGGAGCCAAACTATCAGCCTCCAGTAACTTTTATTGTGGTGCAAAAAAGACATCACACCAGGTTGTTTGCGAACAATCACAGGGACAGGAGCAGCACAGATAGGAGTGGGAATATAATGCCTGGTAAGTTTGGCCGAACCGTTGTTGATTCGAAAATCTGTCATCCAACAGAATTTGATTTTTATCTCTGCAGTCACGCTGGTATTCAGGGGACGAGTCGACCAGCTCATTATCATGTCTTGTGGGATGAAAACAACTTTACAGCAGATGGAATTCAGTCTCTGACAAACAATCTGTGTTATACATATGCTAGGTGTACACGTTCTGTATCTGTTGTTCCTCCTGCATATTATGCACATCTAGCAGCATTTCGTGCCCGGTTTTACATGGAGCCAGACCTGCAAGAGAATGGCTCAACCGGCGGTGGCAGCATGGGTCACGGTTCCAAAGCAACACGAGCAGCCGGAGAATGTGGGGTCCGACCATTGCCAGCCTTAAAAGAAAATGTAAAGAAGGTAATGTTTTACTGTTAG 3015 0.4345 MKESSEQHLVIKTHLQNSINPLKKSPKTVQNGKGPPPPPPPSQEPHNTKPQNSHNHSQPPKNRGRRRSRGGRKSDQGDVFMRPACRPCTVANKPVSENQGQIMVPRSTVNGPVVNGGNNSCDVVMGGFPTSSKSLSFAPRPGYGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVSSRTVNRAIMAELVKLYKESDLGMRLPAYDGRKGLYTAGELPFAWREFKIKLVDEDDGVNGPKRAREYKVVIKFVARANLHHLGQFLAGKRADAPQEALQILDIVLRELSNKRFCPIGRSFFSPDIRTPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVVEFVGQLLGKDVLSRPLSDADRVKIKKALRGVKVEVTHRGSVRRKYRVSGLTSQPTRELVFPVDDKSTMKSVVEYFQEMYGFTIQLTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDRENDILRTIQHNAYDQDPYAKEFGIKISEKLASVEARILPAPWLKYHDTGKEKNCLPQVGQWNMMNKKMINGMTVNRWACINFSRNVQDSVARSFCSELAQMCEISGMEFNPEPVIPIYNAKPEQVEKALKHVYHVSMNKTKGKELELLLAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPVRGMVSGGMIRDLLISFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDRSSTDRSGNIMPGKFGRTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDLQENGSTGGGSMGHGSKATRAAGECGVRPLPALKENVKKVMFYC 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1494 1004 CDD Piwi_ago-like 503 957 IPR045246 -
Mibi13g1494 1004 SMART DUF1785_2 292 344 IPR014811 -
Mibi13g1494 1004 Pfam Argonaute linker 2 domain 485 531 IPR032472 -
Mibi13g1494 1004 SUPERFAMILY PAZ domain 339 499 IPR036085 GO:0005515
Mibi13g1494 1004 Gene3D - 702 1004 IPR036397 GO:0003676
Mibi13g1494 1004 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 126 959 - -
Mibi13g1494 1004 MobiDBLite consensus disorder prediction 1 84 - -
Mibi13g1494 1004 MobiDBLite consensus disorder prediction 10 27 - -
Mibi13g1494 1004 FunFam Protein argonaute-2 338 464 - -
Mibi13g1494 1004 Pfam N-terminal domain of argonaute 149 283 IPR032474 -
Mibi13g1494 1004 SUPERFAMILY Ribonuclease H-like 623 959 IPR012337 -
Mibi13g1494 1004 FunFam protein argonaute 10-like 702 1004 - -
Mibi13g1494 1004 Pfam PAZ domain 371 475 IPR003100 GO:0005515
Mibi13g1494 1004 Pfam Argonaute linker 1 domain 293 342 IPR014811 -
Mibi13g1494 1004 Pfam Mid domain of argonaute 542 619 IPR032473 -
Mibi13g1494 1004 Gene3D paz domain 338 463 - -
Mibi13g1494 1004 Pfam Piwi domain 634 957 IPR003165 GO:0003676
Mibi13g1494 1004 CDD PAZ_argonaute_like 344 458 - -
Mibi13g1494 1004 ProSiteProfiles Piwi domain profile. 633 958 IPR003165 GO:0003676
Mibi13g1494 1004 ProSiteProfiles PAZ domain profile. 345 459 IPR003100 GO:0005515
Mibi13g1494 1004 SMART PAZ_2_a_3 349 481 IPR003100 GO:0005515
Mibi13g1494 1004 MobiDBLite consensus disorder prediction 31 46 - -
Mibi13g1494 1004 Gene3D - 523 696 - -
Mibi13g1494 1004 SMART Piwi_a_2 633 958 IPR003165 GO:0003676
Mibi13g1494 1004 FunFam Argonaute 10 523 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1494 Mibi-ChrMibi13 22702273 22709990 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1494 1 1004 Eukaryotic Initiation Factors Gene Family AT5G43810 81.746 0.0 1645