Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1493 ATGAAGCTTCTTCAGTCCGAGGAATCCGCCTCTGAGACTTGTGACCTTCCTGAGGAAACCCAAGAAGAGAAACCCCCAAGTTCTTCCTCTGTGGTCGAAAACGATGATGACTGTGGCCGTGATAATGGTGACGCGGTGCTCGATGTCTTTGGGAAAATTGTGGAGTTCCCAGTATTGGAGAACGCAGAAGAGTCAATGGAGGGGTTGTATTTTTATAAGAATGTTTTCAATTTGATCCCCAAGTCTCTTGGGGGTCTTGGGAAGTTGAAGACATTGAAGTTCTTTGGGAATGAGATTAATTTGTTTCCCCCGGAGTTTGGAAACTTGACGGGCTTGGAGTGCTTGCAGATGAAGATATCTTCTCCTGGGATTGGTGGGTTGCCGTTGAATAAGTTGAAGGGTTTGAAGGAGTTGGAGTTGTCCAAAGTGCCTCCCCGGCCTTCTGCTTTTCCTATATTGACTGAGATTGCTGGTCTTAAGTCCTTGACCAAGCTATCTATTTGCCATTTTTCTATAAGATACCTTCCTCCTGAAATTGGTCTCTTAAAGAAACTAGAGTATCTTGATCTTTCATTCAATAAGATGAAGATGTTGCCCTCCGAAATTAGTTTTTTGAATGGCTTGATATCTCTGAAAGTTTCCAATAATAAGTTGGTGGAACTTCCATCAACCATGGCCTCTCTGTCTGGGCTGGAGAACTTGGACCTGTCAAATAATAGGTTGACTTCACTGGGGCCTCTTGAACTTGGGTCTATGCATAAACTTCAGAATTTAAATCTTCAGTTCAATAAGCTGCGGAGCATACTTCAAATACCTTCTTGGATTTGCTGTAATATGGAAGGAAATGACAAAGGTGAATGCAGCGATGATTTTAACAGTTCTTCTGTTGAAATGGATGTCTATGAAACTAATTCACTGGATAACGATGGACTACTTTCACATGCATCTTGTAATGGCTCATCAAGCCTAGTAAGTAGCTCCTCACCTAGCAGATGTTTTGCAACCCGGAAATCAGGTAAAAGGTGGAAGCGGCGGCACTACTTACAGCAGAAAGCTCGTCAAGAGTGCTTAAACAATAGCAGGAAGTGGAAAGGTTTAAATAATTCACAGCTGAGCAAGGAGATGCAAAGAATTTGTGAATCAGAAAACCAAGGCAGTCTTGCTCTTGAAAACTGCGGTGAAGCTCATCCATCAGACAGTGTGGATCTGGATGATGAAGTTAAAAGGATGGTTTCAGAAGAAGCTGGGAATGACAGTGTAATTGATGATGTTAATAATGATGAAGTGGGTATTGAAAAGCAGATTTCTAAGGATCGCTGTTCTAGTGAAAGTGAAGATGAAAAAGATGCTTCCTTACACCCCTTGGAGAATAAATCTGGTAGGCAGGACAATGCATCAAGCTCAGAATCTTTGAAGCATATTTCTAAATCAAAGAGACATTCAGAAAGGGATCTTGATAATCCTAAACCATGCAAGTCCAGAAAACCAATTGGTGATAGCTCATCGTTGTCCTACAAGTACAGTAGGTTATCATTTTGTGGCACTGAAGACCATCTGCCAGATGGCTTTTATGATGCTGGACGAGATAGACCTTTTATGACCCTTGAGAGTTATGAGCAGAATCAGTGTTCTGCCTCTCGTGAAGTCATCTTATTGGACAGAGAAAGGGATGAAGAACTGGATGCCATAACACTTTCTGCTCAGTCATTGGTGTTTCATTTGAAGCAGTTAAATGATATTACCAAGCATGCAAATCAAGCTGCTCTTGATAGCTTCCAGGTTGCTTCACTGCTTGCACTCTTTGTATCAGATCATTTTGGGGGCAGTGATAGAGGCGCTATTGTGGAAAGGACACGAAAATCAGTGTCTGGTTCAAATTATCATAAGCCTTTTGTCTGTACATGCTCAACTGGAAGCAGCAGTGATATTAGTGCTTCCTCTAAACCAGTTATAAACAGTGCAGAAGACATTACTCTTACCAATATCTCTGAAAAATCTCTCCAGTCTATAAAAAGAAGACGAAGTTCGATCATAGTTCCCATTGGATCTGTGCAGTTTGGTGTGTGTAGACATAGAGCTCTGCTTTTGAAGTATTTATGTGATCGCATGGAGCCTCCAGTACCTTGTGAGCTTGTCAGGGGGTTCTTGGATTTTTCACCACATGCCTGGAACATCATCATAGTTAACAGAGGTGATACCCAGGTTAGAATGTTAGTTGATGCATGCCGGCCGCATGATATAAGAGAAGAGGAAGACCCTGAGTTCTTTTGCAGGTATATACCTCTTAGTCGAACCAAAATTCCTATTTCATCTGATGGAACTCCTGGTCCGGGTTGTTCATTTCCATCTCTCTCTACATGTGACGAATTTGAGAAGGCATCTTCAAGTACTTTAGTTCGGTGCAAATTTGGGTTGATTGAGGCTGCAGCAAAGGTGCGTACTTTGGAAGTGAAGGAGAGTTCACTGGAGAAAATAAGAAACTTTGAATTTAATTGTTTGGGAGAAGTGAGAATTTTAGGTGCTCTGAAACATCCCTGTATAGTTGAAATGTATGGACACCAGATATCTTACAAGTGGACTCTTTCAGAGGATGGTAATCCTGAGCATTGTGTGTTAAGGTCTGCGATTTTTATGGAGTACACTGAAGGGGGCTCTTTGAGAACTTATCTTGATAAGCTATCAAAAGCTGGTGAAAAGCATGTTCCAGTAGAGCTGGCTTTTTGTATTGCCAAAGATGTTGCGTGTGCATTGTCAGAGCTGCACTCAAAGCACATAATTCATCGTGATGTAAAGAGTGAAAACGTCCTGATTGCTTTGGATAGAAAGAAAGATGATGGCACCCCTACAGTGAAGCTCTGTGATTTTGACAGTGCAGTGCCGCTAAGATCACCTTTGCATAGCTGCTGTATAGCTCATGTGGGAACACCCCCTCCTTATGTATGCACTGGAACACCGCGATGGATGGCTCCAGAGGTTATGCGGACTATGTACAAGGAAAATACTTATGGATTGGAAGTTGATATCTGGTCATTTGGATGCTTACTTCTGGAGCTTCTCACACTGCTTGTTCCATATTCTGGGCTATCTGATGTACAATTCCATGACAACTTACAGATGGGTAAACCGCCACAGTTAACCGAAGATCTGGAGGCCCTGAGTTTACCAAAAGAAGAACCGACGGTGATTCGATCCAGTGATGAGCCGCAAAAATCAGATACCAAGGTAGACATGATGAAATTCCTTGTTGATTTGTTTCATAAGTGCGTGCAAGAAAATCCAGCGAAACGGCCTACAGCGAAAGAAATCTATGAAATACTGCTTGATCAAACAAGCCATCTAAAGGTACAAGATGTTGGGAAGAGTTAG 3366 0.4207 MKLLQSEESASETCDLPEETQEEKPPSSSSVVENDDDCGRDNGDAVLDVFGKIVEFPVLENAEESMEGLYFYKNVFNLIPKSLGGLGKLKTLKFFGNEINLFPPEFGNLTGLECLQMKISSPGIGGLPLNKLKGLKELELSKVPPRPSAFPILTEIAGLKSLTKLSICHFSIRYLPPEIGLLKKLEYLDLSFNKMKMLPSEISFLNGLISLKVSNNKLVELPSTMASLSGLENLDLSNNRLTSLGPLELGSMHKLQNLNLQFNKLRSILQIPSWICCNMEGNDKGECSDDFNSSSVEMDVYETNSLDNDGLLSHASCNGSSSLVSSSSPSRCFATRKSGKRWKRRHYLQQKARQECLNNSRKWKGLNNSQLSKEMQRICESENQGSLALENCGEAHPSDSVDLDDEVKRMVSEEAGNDSVIDDVNNDEVGIEKQISKDRCSSESEDEKDASLHPLENKSGRQDNASSSESLKHISKSKRHSERDLDNPKPCKSRKPIGDSSSLSYKYSRLSFCGTEDHLPDGFYDAGRDRPFMTLESYEQNQCSASREVILLDRERDEELDAITLSAQSLVFHLKQLNDITKHANQAALDSFQVASLLALFVSDHFGGSDRGAIVERTRKSVSGSNYHKPFVCTCSTGSSSDISASSKPVINSAEDITLTNISEKSLQSIKRRRSSIIVPIGSVQFGVCRHRALLLKYLCDRMEPPVPCELVRGFLDFSPHAWNIIIVNRGDTQVRMLVDACRPHDIREEEDPEFFCRYIPLSRTKIPISSDGTPGPGCSFPSLSTCDEFEKASSSTLVRCKFGLIEAAAKVRTLEVKESSLEKIRNFEFNCLGEVRILGALKHPCIVEMYGHQISYKWTLSEDGNPEHCVLRSAIFMEYTEGGSLRTYLDKLSKAGEKHVPVELAFCIAKDVACALSELHSKHIIHRDVKSENVLIALDRKKDDGTPTVKLCDFDSAVPLRSPLHSCCIAHVGTPPPYVCTGTPRWMAPEVMRTMYKENTYGLEVDIWSFGCLLLELLTLLVPYSGLSDVQFHDNLQMGKPPQLTEDLEALSLPKEEPTVIRSSDEPQKSDTKVDMMKFLVDLFHKCVQENPAKRPTAKEIYEILLDQTSHLKVQDVGKS 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1493 1121 FunFam Leucine-rich repeat protein kinase family protein 56 298 - -
Mibi13g1493 1121 SMART LRR_sd22_2 228 249 - -
Mibi13g1493 1121 SMART LRR_sd22_2 252 273 - -
Mibi13g1493 1121 SMART LRR_sd22_2 182 204 - -
Mibi13g1493 1121 MobiDBLite consensus disorder prediction 1 38 - -
Mibi13g1493 1121 SMART LRR_bac_2 228 247 - -
Mibi13g1493 1121 SMART LRR_bac_2 205 224 - -
Mibi13g1493 1121 SMART LRR_bac_2 182 201 - -
Mibi13g1493 1121 MobiDBLite consensus disorder prediction 472 493 - -
Mibi13g1493 1121 ProSiteProfiles Leucine-rich repeat profile. 184 205 IPR001611 GO:0005515
Mibi13g1493 1121 Pfam Ethylene-responsive protein kinase Le-CTR1 659 740 - -
Mibi13g1493 1121 SMART LRR_typ_2 205 227 IPR003591 -
Mibi13g1493 1121 SMART LRR_typ_2 228 251 IPR003591 -
Mibi13g1493 1121 SMART LRR_typ_2 252 274 IPR003591 -
Mibi13g1493 1121 SMART LRR_typ_2 182 204 IPR003591 -
Mibi13g1493 1121 SMART LRR_typ_2 86 108 IPR003591 -
Mibi13g1493 1121 PANTHER SERINE/THREONINE-PROTEIN KINASE SBK1 112 1112 - -
Mibi13g1493 1121 Pfam Protein kinase domain 816 1103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g1493 1121 SUPERFAMILY Protein kinase-like (PK-like) 826 1106 IPR011009 -
Mibi13g1493 1121 SMART serkin_6 784 1111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g1493 1121 ProSiteProfiles Protein kinase domain profile. 792 1115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g1493 1121 FunFam Leucine-rich repeat protein kinase family protein 830 1112 - -
Mibi13g1493 1121 ProSiteProfiles Leucine-rich repeat profile. 254 275 IPR001611 GO:0005515
Mibi13g1493 1121 MobiDBLite consensus disorder prediction 457 471 - -
Mibi13g1493 1121 MobiDBLite consensus disorder prediction 434 501 - -
Mibi13g1493 1121 MobiDBLite consensus disorder prediction 434 456 - -
Mibi13g1493 1121 ProSiteProfiles Leucine-rich repeat profile. 230 251 IPR001611 GO:0005515
Mibi13g1493 1121 ProSitePatterns Serine/Threonine protein kinases active-site signature. 925 937 IPR008271 GO:0004672|GO:0006468
Mibi13g1493 1121 SUPERFAMILY L domain-like 65 273 - -
Mibi13g1493 1121 Gene3D Transferase(Phosphotransferase) domain 1 790 1119 - -
Mibi13g1493 1121 Gene3D Ribonuclease Inhibitor 48 288 IPR032675 -
Mibi13g1493 1121 Pfam Leucine rich repeat 208 265 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1493 Mibi-ChrMibi13 22634742 22644890 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1493 812 1106 MAP Kinase Kinase Kinase AT2G24360 29.392 1.74e-24 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-2 Mibi13g1493 Pkinase 1.5e-37 CL0016