Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1488 ATGAATCAAGTGGTGAAAGAGGAGATTATTATGGAGGCGGCGGCTCCCCCACAGCCAATGGAGGGGCTACACGAAGCAGGTCCGCCGCCGTTTCTGACAAAAACATATGACATCGTCGACGATGTTTCCACCAACCACATAGTTTCATGGAGCCGAGGTAACAATAGTTTCGTTGTCTGGGATCCACAATCCTTCTCTTTGACCCTCCTTCCCAGATTCTTCAAACACAGCAATTTCTCCAGCTTCGTCAGACAGCTTAATACCTATGGATTCAGAAAGGTTGATCCAGATAGGTGGGAATTTGCCAATGAAGGGTTTCTGAGAGGACAAAAGCATCTTCTGAAGAACATAAGGAGAAAGAAAACAACTCAACAACATCACAATCATCATCAAGCCCTAGATCCATGCATGGAAGTAGGCCGGTTCGGGCTTAACGGAGATGTGAACCGGCTCGGGCGAGACAAGCAGGTACTCATGCTGGAACTTGTAAAACTCAGACAACAGCAACAAAACACCAAAACCTATCTTCAACAAATGGAAAGTAGGCTCAAGAGAACCGAACAAAAGCAGAAACAAATGATAAATTTCTTAGCAAGAGCCATGCAAAACCCTAACTTTGTTCACCAGTTAGTTCAGAAAAAAGAATGGAAGAAGGAGCTTGAAGAAGCAATCTCAAAGAAGCGAAGAAGAACCATAGATCAAGGACCTAGTAGTAAAAATGATGATGATGTTGAGTTATTAGTTGCTCACCAATTAGATTGCTCAGATTTCGTTGAAGAACTTGAACCTCATAATATTATTGCTACTGAGGATTTGGATTTGATTGGCAAGTTAGAAGAAGAAGATAAACAACATATAAATGGGTTCGGCCGAGTTGGGAATGAAAATATTATTAATAGAGAGAAAGAGATTATTAATGATGATGAAGTGTTTTGGCAAGACTTGTTGAGCGAGGATGTTGAAGAAGTTGTACGAGGTTTCGAGGAGGAAGATGTCGATGTGTTGGCTGAACAACTAGGTTATTTAGCTTCTAATACTCCTCATCAGTAA 1050 0.4152 MNQVVKEEIIMEAAAPPQPMEGLHEAGPPPFLTKTYDIVDDVSTNHIVSWSRGNNSFVVWDPQSFSLTLLPRFFKHSNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKNIRRKKTTQQHHNHHQALDPCMEVGRFGLNGDVNRLGRDKQVLMLELVKLRQQQQNTKTYLQQMESRLKRTEQKQKQMINFLARAMQNPNFVHQLVQKKEWKKELEEAISKKRRRTIDQGPSSKNDDDVELLVAHQLDCSDFVEELEPHNIIATEDLDLIGKLEEEDKQHINGFGRVGNENIINREKEIINDDEVFWQDLLSEDVEEVVRGFEEEDVDVLAEQLGYLASNTPHQ 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1488 349 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 17 240 IPR027725 -
Mibi13g1488 349 FunFam Heat shock transcription factor 1 24 121 - -
Mibi13g1488 349 SUPERFAMILY "Winged helix" DNA-binding domain 27 120 IPR036390 -
Mibi13g1488 349 SMART hsfneu3 27 120 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi13g1488 349 Coils Coil 148 189 - -
Mibi13g1488 349 ProSitePatterns HSF-type DNA-binding domain signature. 70 94 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi13g1488 349 Pfam HSF-type DNA-binding 31 120 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi13g1488 349 PRINTS Heat shock factor (HSF) domain signature 69 81 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi13g1488 349 PRINTS Heat shock factor (HSF) domain signature 31 54 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi13g1488 349 PRINTS Heat shock factor (HSF) domain signature 82 94 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi13g1488 349 Gene3D - 23 122 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1488 Mibi-ChrMibi13 22448861 22450780 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1488 17 346 HSF AT3G22830 54.301 2.66e-127 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mibi13g1488 HSF_DNA-bind 1.4e-31 CL0123