Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1487 ATGGATCGAGTGGTGAAAGAGGAGATTATTATGGAGGCGGCGGCTCCTCCACAGCCAATGGAGGGGCTACACGAAGCAGGTCCACCGCCGTTTCTGACAAAAACATATGACATCGTCCACGATGTTTCCACCAACCACATAGTTTCATGGAGCCGAGGTAACAATAGTTTCGTTGTCTGGGATCCGCAATCCTTCTCGTTGAACCTCCTTCCCAGATTCTTCAAACACAGCAATTTCTTCAGCTTTGTCAGACAGCTTAATACCTATGGATTCAGAAAGGTTGATCCAGATAGGTGGGAATTCGCCAATGAAGGGTTTCTTAGAGGACAAAAGCATCTTCTGAAGAACATAAGGAGAAAGAAAACAACTCAACAACATCACAATCATCATCAAGCCCTAGATCCATGCGTGGAAGTAGGCCGGTTTGGGATGAACGGAGATGTGAACCGGCTCGGGAGAGACAAGCAGGTACTCATGTTGGAACTTGTAAAACTCAGACAGCAACAACAAAACACCAAAACCTACCTTCAACAAATGGAAAGTAGGCTCAAGAGAACCGAACAAAGGCAGCAACAAATGATGAATTTCTTAGCAAGAGCCATGCAAAACCCTAACTTTGTTCACCAGTTAGTTCAGAAAAAAGAATGGAAGAAGAAACTTGAAGAAGCAATCTCAAAGAAGAGAAGAAGAACCATAGGTCACGGACCTAGTAGCATTAATAATGATGATGTTGAGTTATTAGTTGGTCACCAATTAGATTGCTCAGATTTCGTTGAAAAACTTGAACCTGATAATATTATTGCTGCTGAGGATTTGGATTTGATTGGCAAGTTGGAAGAAGAAGATCAACAACATATAAATGAGTTCGTCCAAGTTGGAAATGAAAGTATGATTAATAGAGAGAAAGAGATTATTAATGAGGATGAAGTGTTTTGGCAAAACTTGTTGAGCGAGGATGTTGAAGAAGTTGTACGACGTTTCGAGGAAGAAGATGTTGATGTGTTGGCTGAGCAACTTGGTTATTTAGCTTCTAGTAGTCCTCATCAGTAA 1050 0.4152 MDRVVKEEIIMEAAAPPQPMEGLHEAGPPPFLTKTYDIVHDVSTNHIVSWSRGNNSFVVWDPQSFSLNLLPRFFKHSNFFSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKNIRRKKTTQQHHNHHQALDPCVEVGRFGMNGDVNRLGRDKQVLMLELVKLRQQQQNTKTYLQQMESRLKRTEQRQQQMMNFLARAMQNPNFVHQLVQKKEWKKKLEEAISKKRRRTIGHGPSSINNDDVELLVGHQLDCSDFVEKLEPDNIIAAEDLDLIGKLEEEDQQHINEFVQVGNESMINREKEIINEDEVFWQNLLSEDVEEVVRRFEEEDVDVLAEQLGYLASSSPHQ 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1487 349 Pfam HSF-type DNA-binding 31 120 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi13g1487 349 SUPERFAMILY "Winged helix" DNA-binding domain 27 120 IPR036390 -
Mibi13g1487 349 SMART hsfneu3 27 120 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi13g1487 349 Gene3D - 23 122 IPR036388 -
Mibi13g1487 349 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 17 231 IPR027725 -
Mibi13g1487 349 PRINTS Heat shock factor (HSF) domain signature 82 94 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi13g1487 349 PRINTS Heat shock factor (HSF) domain signature 69 81 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi13g1487 349 PRINTS Heat shock factor (HSF) domain signature 31 54 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi13g1487 349 FunFam Heat shock transcription factor 1 24 121 - -
Mibi13g1487 349 Coils Coil 148 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1487 Mibi-ChrMibi13 22436851 22439915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1487 17 346 HSF AT3G22830 51.475 1.11e-120 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mibi13g1487 HSF_DNA-bind 2.7e-30 CL0123