Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1470 ATGGACAAAGCTAATGCCGCCAATAGAAGGCTCTCTGGCCTCAAAGATTCTAGTTACAGAACCAGAATTGCTGTGACCAATGGCCTTCGCAAGAAACTGAAGGAGCTAATGATGGAGTTTCAGGAGCTGAGACAGAAGATGATGACTGAGTACAAAGAGACAGTGGGAAGGCGTTATTTTACTGTGACAGGTGAACACACAGAAGAAGAAGTGATTGAGAAGATAATCTCAAATGGGAATGGGGAAGAGGGGTTTCTGAGCAAAGCAATTCAAGAGCATGGGAGAGGGAAAGTTCTAGAGACAGTGGTGGAGATACAGGACAGGCATGATGCTGCTAAAGAGATTGAGAAGAGTCTTTTGGAGCTTCATCAGGTGTTTCTAGACATGGCAATGATGGTTGAAGCTCAGGGAGAGAAGATGGATGACATTGAGCATCATGTGCTTCATGCTTCTCACTATGTCAAAGATGGCACTAAAAATCTGCACACTGCAAAGAAATACCAGAGTGGCAGTAGGAAGTGGATGTGCATTGGGATTATTCTTCTCCTCATTTTGATCCTCGTTATTGTTATCCCTATTGCTACTAGTTTCAGCAGCTCTTGA 603 0.4378 MDKANAANRRLSGLKDSSYRTRIAVTNGLRKKLKELMMEFQELRQKMMTEYKETVGRRYFTVTGEHTEEEVIEKIISNGNGEEGFLSKAIQEHGRGKVLETVVEIQDRHDAAKEIEKSLLELHQVFLDMAMMVEAQGEKMDDIEHHVLHASHYVKDGTKNLHTAKKYQSGSRKWMCIGIILLLILILVIVIPIATSFSSS 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1470 200 Gene3D - 97 198 - -
Mibi13g1470 200 Pfam SNARE domain 139 190 IPR000727 -
Mibi13g1470 200 ProSitePatterns Syntaxin / epimorphin family signature. 108 148 IPR006012 GO:0005484|GO:0006886|GO:0016020
Mibi13g1470 200 Pfam Syntaxin 1 137 IPR006011 GO:0016020
Mibi13g1470 200 Gene3D - 1 58 - -
Mibi13g1470 200 FunFam Syntaxin 132 95 195 - -
Mibi13g1470 200 CDD SNARE_syntaxin1-like 101 161 - -
Mibi13g1470 200 SUPERFAMILY t-snare proteins 9 157 IPR010989 GO:0016020|GO:0016192
Mibi13g1470 200 Coils Coil 26 53 - -
Mibi13g1470 200 PANTHER SYNTAXIN 23 186 IPR045242 -
Mibi13g1470 200 SMART tSNARE_6 97 164 IPR000727 -
Mibi13g1470 200 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 102 164 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1470 Mibi-ChrMibi13 21950641 21951243 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1470 1 200 SNARE and Associated Proteins AT1G08560 75.000 2.93e-94 275