Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1451 ATGGATTGTTACTCAGACTTTACTCACATAGTTGGTTTTGTGTTTACGGCCGTTTGCAAAACTTGCACTCCCAAAGCTTCAACCATGGCCGTGGGAAAGAACAAGAGAATTTCAAAGGGGAAAAAGGGAGGAAAGAAGAAGGCAGCTGATCCCTTTGCCAAGAAGGATTGGTATGATATCAAAGCTCCTTCTGTTTTCCAAGTTAAGAATGTGGGTAAAACCCTCGTCACTCGTACTCAGGGTACAAAGATTGCTTCAGAAGGACTGAAGCATAGAGTGTTTGAGGTCTCATTGGCTGACCTTCAAGATGATGAGGATCACGCTTTCAGGAAGATTAGGTTGAGAGCTGAGGATGTTCAAGGGAAGAATGTTCTCACAAACTTCTGGGGAATGGACTTCACAACTGATAAGTTGAGGTCATTGGTCCGCAAGTGGCAAACTCTGATCGAAGCTCATGTTGATGTGAAGACCACGGATAATTACACATTGAGGATGTTCTGCATCGGCTTCACTAAGAGGCGTGCAAACCAGGTCAAGAGGACCTGTTATGCCCAATCAAGCCAGATCAGACAGATCCGCAGAAAAATGAGAGAGATCATGGCTAACCAGGCCACATCCTGTGATTTGAAAGAGTTGGTTCGCAAGTTCATCCCTGAGATGATTGGAAAAGAGATTGAGAAGGCAACATCTAGCATCTACCCTTTGCAAAACGTGTTCATTCGCAAGGTCAAGATCTTGAAGGCTCCTAAGTTTGATCTTGGAAAACTTATGGAGGTTCATGGAGATTATTCAGAGGATGTTGGTGTAAAGGTAGACAGACCAGCAGATGAGACAATGGTCGAGGCTCCCACCGAAATTGTTGGAGCTTAA 870 0.4448 MDCYSDFTHIVGFVFTAVCKTCTPKASTMAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFQVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEDHAFRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMREIMANQATSCDLKELVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADETMVEAPTEIVGA 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1451 289 ProSitePatterns Ribosomal protein S3Ae signature. 89 101 IPR018281 GO:0003735|GO:0005840|GO:0006412
Mibi13g1451 289 SMART Ribosomal_S3Ae_2 43 249 IPR001593 GO:0003735|GO:0005840|GO:0006412
Mibi13g1451 289 Pfam Ribosomal S3Ae family 44 249 IPR001593 GO:0003735|GO:0005840|GO:0006412
Mibi13g1451 289 Hamap 40S ribosomal protein S1 [RPS3A]. 29 286 IPR027500 GO:0003735|GO:0005840|GO:0006412
Mibi13g1451 289 PANTHER 40S RIBOSOMAL PROTEIN S3A 21 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1451 Mibi-ChrMibi13 21565271 21568034 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1451 29 289 Cytoplasmic Ribosomal Protein Gene Family AT4G34670 87.786 1.21e-166 461