Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1447 ATGGGTAACAATCGTGGCAAGGAAGGGGTTATCCCTACGAGAAAATGTTCTCCCGCCTTCCCATTTCTTGAATTCTCCCTTCTCTCTTCTCATCACCAAAAGCGCAACAAAGAAGAACAACAACAACAAAACAAACCCCACAATTCTAGAGAGAGAGAGAGAGAGAGAGAGAGTCAAAAAGCAGAAGTGAAAGAGGAATGTAGTGAGGCTACCTCTCTGGAAATGGACACACCAGAGAGGAACCAGATCGGAACACCCATCTCCAGATTTGAGGACTCACCCGTCTTCAACTTCATCAACAGTCTTTCTCCTATAAAGCCTGTGAAGTCTGTTCATAGTATTCAGACCATCAATTCACTCAGTTTTTCATCTCCTCCATCTGTGTTCACATCACCCCATGTCAACTGTCACAAAGAATCTAGATTTCTCAGGAGGCATAACGTTTTAGATGCATCAAAGCAAAAGGTTTTGGCTGAAGATGGGGATAAAATATTTTCAAGTGAAGAAGCACCTGCCGATTCAACTCATGCATATCATAACTCAAGCGAGCTACAACAAGGAAATGCTGATCAGCGGATTCCCCTGAAAGATTCAGCAATTGAACCATCTAATGAGCAGCCAGACTTTCCAATTGAGCTACCACAAACCTTGAAATACGATTGTGGTAGCCCTGCTTGTGATCCTCCTCCTGGTGGTGATGAGACAGATTCTCTTCTGGATTTGTCGAGTAAGGCGGCTTCAGATGTTACCTATGTTGATGAAGCCTGTAAAAAAAATTCACCTGAGGCTGAAGCGCTCCTTCCCGGAATATGTCAAATTGAGCCAAGAGGTGGAGGCTCAGAATGTGACTGGGATGGTTTACTTGCAGATGCTACCGATCTGTTAATTTTCAACTCTCCAAATGAAAGAGAAGTGTTGAAGGGTCTAATGCAGAAATCCTTTGATTCCTCGGGACGGTATAGCAATTTTATGTCTCAATTGCCACAAACTACCTTAAGTCATGTTGAGGACATGCGAATTGTCAATCCAGTTGCTTCTGGTTCAGAACATGAAACTGAAGATCACCCTTCTCAACAAGGAGAAGCCATTGAGAGTGATCAGGCGCAGGACAGTCTTTCAAACGCTGCTGGTATGGGCGGCAATGTTAACATTACATTGGATAATCAGCTTGTTTCTATCACACGCCATGGCATGCGGAGGCGTTGTCTAGACTTTGAGATGGTTGGAGGTAGAAGGAAAAACTCCAATGATGGTTCAAATAGCAGTAATTCCAGCACATTACAATCTGATGAGAGGAATATGGCAAATGATAGGCAACTGCTTCCTGCAAAACCCAATGGTAATTCACAGAGGTGCATGTTGCCTGCAATTGGCTTACACTTGAATGCTCTTGCAGCCGTGAAAGATTACAAAAGCTTAAACAATGAAAATATATCTTCTGGACGACAACTCAGTCTGCCAAGCCCTGCCTTGCAACAGTCTTCAAGCCAAGAAAATTGTCTAGCATTGGTGCCTGTATCAATTGAAGGAAATTCAGATCTGCTGGACAATGGGGTTCAGCTTGCTGAAGATTGTTCCCAGCCCTCAGGATATGTGGTTGATGAAGATTTCAACCAGAATAGCCCCAAAAAGAAAAGGCGCAAGTCGGAGCCAGCTGGAGATGGCGAGTCTTGTAAGCGCTGTAATTGCAAGAAATCAAAGTGTCTGAAGCTTTATTGTGAGTGCTTTGCTGCTGGTGTCTACTGCATAGAACCTTGCTCTTGCCAAGATTGCTTCAACAAGCCTATTCATGAGGATACTGTTCTTGCAACTCGCAAGCAGATTGAGTCTCGTAATCCTCTAGCCTTTGCTCCTAAAGTCATTCGAAGCTCGGATTCTGTACCTGAAATTGGGGATGATCCCAACAAAACTCCAGCTTCTGCACGACATAAAAGAGGATGTAACTGCAAGAAATCAAGCTGCCTAAAGAAATATTGTGAATGCTATCAGGGTGGTGTCGGTTGCTCCATTGGCTGTAGATGTGAAGGGTGCAAGAACACGTATGGCAGAAAGGATGGTTCTGCTCCCATTGGAATAGAAGCTGAACCAGAGGAAGAAACAGAATCATCAGAGAAGGCTGTGGCTGAAAAATCTTTACAAAAATCCGAGATGCAGAACGATGATGAACATCCAGAGTCGACTCTTCCTATGACGCCATTACGTATTTGCAGACCATTGCTTCCTCTATCATTTTCATCAAAGGGAAAACCACCAAGATCTTCTTTCATTACAACCATACCAGCTTCTGGATTGTATGCCAACCAAAAGCTAGGGAAGCCCAGCATCCTTAGGTCTCAACCCAAGTTCGAAAAACAATTCAAACCAGTTTCCAACGACGAAATGCCAGAGGTTCTCCGGGGAGATGGATCTCCCAGCATCAAGACATCGTCTCCAAATGGCAAGAGGATCTCATCTCCTAATGTTGACATTGGATCATCTCCTAGTCGTAGAAGTGGCAGGAAGTTGATATTACAATCCATCCCATCATTCCCTTCTCTCTCTGCTCCTCACCTTTAG 2556 0.4405 MGNNRGKEGVIPTRKCSPAFPFLEFSLLSSHHQKRNKEEQQQQNKPHNSRERERERESQKAEVKEECSEATSLEMDTPERNQIGTPISRFEDSPVFNFINSLSPIKPVKSVHSIQTINSLSFSSPPSVFTSPHVNCHKESRFLRRHNVLDASKQKVLAEDGDKIFSSEEAPADSTHAYHNSSELQQGNADQRIPLKDSAIEPSNEQPDFPIELPQTLKYDCGSPACDPPPGGDETDSLLDLSSKAASDVTYVDEACKKNSPEAEALLPGICQIEPRGGGSECDWDGLLADATDLLIFNSPNEREVLKGLMQKSFDSSGRYSNFMSQLPQTTLSHVEDMRIVNPVASGSEHETEDHPSQQGEAIESDQAQDSLSNAAGMGGNVNITLDNQLVSITRHGMRRRCLDFEMVGGRRKNSNDGSNSSNSSTLQSDERNMANDRQLLPAKPNGNSQRCMLPAIGLHLNALAAVKDYKSLNNENISSGRQLSLPSPALQQSSSQENCLALVPVSIEGNSDLLDNGVQLAEDCSQPSGYVVDEDFNQNSPKKKRRKSEPAGDGESCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNKPIHEDTVLATRKQIESRNPLAFAPKVIRSSDSVPEIGDDPNKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSIGCRCEGCKNTYGRKDGSAPIGIEAEPEEETESSEKAVAEKSLQKSEMQNDDEHPESTLPMTPLRICRPLLPLSFSSKGKPPRSSFITTIPASGLYANQKLGKPSILRSQPKFEKQFKPVSNDEMPEVLRGDGSPSIKTSSPNGKRISSPNVDIGSSPSRRSGRKLILQSIPSFPSLSAPHL 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1447 851 MobiDBLite consensus disorder prediction 409 432 - -
Mibi13g1447 851 MobiDBLite consensus disorder prediction 701 723 - -
Mibi13g1447 851 MobiDBLite consensus disorder prediction 535 559 - -
Mibi13g1447 851 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 75 847 IPR044522 GO:0003700
Mibi13g1447 851 MobiDBLite consensus disorder prediction 687 732 - -
Mibi13g1447 851 MobiDBLite consensus disorder prediction 173 190 - -
Mibi13g1447 851 MobiDBLite consensus disorder prediction 803 845 - -
Mibi13g1447 851 ProSiteProfiles CRC domain profile. 557 682 IPR005172 -
Mibi13g1447 851 MobiDBLite consensus disorder prediction 538 559 - -
Mibi13g1447 851 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 645 680 IPR005172 -
Mibi13g1447 851 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 559 594 IPR005172 -
Mibi13g1447 851 MobiDBLite consensus disorder prediction 361 376 - -
Mibi13g1447 851 MobiDBLite consensus disorder prediction 170 190 - -
Mibi13g1447 851 MobiDBLite consensus disorder prediction 346 376 - -
Mibi13g1447 851 MobiDBLite consensus disorder prediction 777 851 - -
Mibi13g1447 851 SMART CXC_2 642 683 IPR033467 -
Mibi13g1447 851 SMART CXC_2 556 597 IPR033467 -
Mibi13g1447 851 MobiDBLite consensus disorder prediction 30 73 - -
Mibi13g1447 851 MobiDBLite consensus disorder prediction 27 73 - -
Mibi13g1447 851 MobiDBLite consensus disorder prediction 413 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1447 Mibi-ChrMibi13 21537230 21544592 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1447 90 850 CPP Transcription Factor Family AT4G14770 43.226 9.78e-165 492
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Mibi13g1447 TCR 3.7e-11 No_clan