Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1445 ATGCCTCCTTTGGATTCGGTTTCTTCTCTTGTATCAAAGCGAAGGATTTTTGAGGATTCTGTAGTTGGAGGAGGTTTACGAACGAAAATGGAATTGGAAGGAGGAGCTCTGGATTCCAAGATGAAGGGTATTGGAAGAGTTAGTAGTAATGATAAAATGTTCAGAGCTGATAAGATTGATCTCAAAAGTTTGGACGCACAGCTTGACAAGCACTTTAGCAGGGTTTGGTCTAGGAACATTGATTCCAAAAGGCCTAAAGAAGAGTGGGAGATTGATTTGGCCAAATTGAATCTCCGATATGTTGTAGCTCATGGAACCTATGGCACTGTTTATAGAGGCACCTATGATAACCAAGATGTTGCAGTGAAAGTTTTGGACTGGGGTGATGATGGTGTCGCCACAGCTGCTGAAACTGCTGCTTTTCGCGCATCATTCCGGCAGGAGGTTGCTGTTTGGCATAAACTTGACCATCCAAATGTTACAAAATTTGTTGGAGCATCAATGGGTACCTTAAATCTTAAAATTCCCACAAAGAACTCTGATGGCCAAGAGTCCCTTCCTTCTAGGGCATGTTGTGTTGTTGTTGAGTATATCACTTGTGGGACACTAAAACAATTATTGTTCAGACATAGGAATAAGAAACTTGCTTTCAAGGTTGTCATCAAGCTGGCTTTAGATCTTGCTAAGGGTCTCAGCTATCTACATTCGAAGAAGATTGTACATCGTGATGTTAAAGCAGAGAATATGTTGCTAGATGGCCGCGGAAACTTGAAAATAGCTGATTTTGGAGTCGCACGAGTTGAAGCACAAAATCCGAGTGACATGACTGGTGAAACTGGAACCCTTGGATACATGGCACCAGAGGTTCTGGATGGTAAGCCTTACAACAGAAGTTGTGATGTTTACAGCTTTGGCATTTGCTTGTGGGAAATATATTGCTGTGATATTCCTTATCCAGATCTTAGCTTTGCTGATGTGTCATCGGCAGTTGTTCGTCAGAATTTGCGACCGGAAATCCCACGATGTTGTCCGACATCTTTGGCTAACATAATGAGGAAGTGCTGGGATGGAAACCCAGACAAGCGTCCGGAAATGGACGAAGTGGTGAGTTTTCTGGAAGCCATAGATACAAGCAAAGGAGGAGGAATGATACCAGAAGATGCCACTCCCAAGTGCTTCTGTTTTGCCCCATCTCGTGGTCCCTAA 1206 0.4328 MPPLDSVSSLVSKRRIFEDSVVGGGLRTKMELEGGALDSKMKGIGRVSSNDKMFRADKIDLKSLDAQLDKHFSRVWSRNIDSKRPKEEWEIDLAKLNLRYVVAHGTYGTVYRGTYDNQDVAVKVLDWGDDGVATAAETAAFRASFRQEVAVWHKLDHPNVTKFVGASMGTLNLKIPTKNSDGQESLPSRACCVVVEYITCGTLKQLLFRHRNKKLAFKVVIKLALDLAKGLSYLHSKKIVHRDVKAENMLLDGRGNLKIADFGVARVEAQNPSDMTGETGTLGYMAPEVLDGKPYNRSCDVYSFGICLWEIYCCDIPYPDLSFADVSSAVVRQNLRPEIPRCCPTSLANIMRKCWDGNPDKRPEMDEVVSFLEAIDTSKGGGMIPEDATPKCFCFAPSRGP 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1445 401 Gene3D Phosphorylase Kinase; domain 1 85 179 - -
Mibi13g1445 401 SUPERFAMILY Protein kinase-like (PK-like) 80 372 IPR011009 -
Mibi13g1445 401 CDD STKc_MAP3K-like 102 372 - -
Mibi13g1445 401 Pfam Protein tyrosine and serine/threonine kinase 98 372 IPR001245 GO:0004672|GO:0006468
Mibi13g1445 401 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 74 375 - -
Mibi13g1445 401 FunFam Kinase suppressor of Ras 1 85 180 - -
Mibi13g1445 401 SMART serkin_6 96 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g1445 401 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Mibi13g1445 401 ProSiteProfiles Protein kinase domain profile. 96 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g1445 401 PRINTS Tyrosine kinase catalytic domain signature 195 208 IPR001245 GO:0004672|GO:0006468
Mibi13g1445 401 PRINTS Tyrosine kinase catalytic domain signature 299 321 IPR001245 GO:0004672|GO:0006468
Mibi13g1445 401 PRINTS Tyrosine kinase catalytic domain signature 233 251 IPR001245 GO:0004672|GO:0006468
Mibi13g1445 401 PRINTS Tyrosine kinase catalytic domain signature 343 365 IPR001245 GO:0004672|GO:0006468
Mibi13g1445 401 Gene3D Transferase(Phosphotransferase) domain 1 200 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1445 Mibi-ChrMibi13 21503326 21508046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1445 45 401 MAP Kinase Kinase Kinase AT3G22750 77.933 0.0 597
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Mibi13g1445 PK_Tyr_Ser-Thr 5.3e-59 CL0016