Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1371 ATGGCTTCGTCTTCTTCCTTGCTCATAATAAAACCATTTCTTTGTTTCATTGTGTTGTTTTTGGCTGCATGTCCAAGTTACGTTCTTGGCATAGCAGATCTAAATGATATAGTAATAGATTCTCCTCTATTAACAAAACATATTCCTACGAATCGTACCATTAAGGTTGATGATGATGGCAATGGAGAATTCAGATCCATTCAAGCTGCCATTGATTCTATTCCTGAAGGAAATAATGAGTGGGTCATCGTCCATGTTAGGAAAGGAGTATACAGAGAGAAGGTGACGATACCAAAGAACAAGCCGTATATATTCTTGAGAGGAAATGGGAGAGGGAAAACTGCTATAGTTTGGTCTCAGAGTTCTGTTGATAATATAGACTCTGCAACTTTCAAAGTGGAGGCTCATGATGTCGTTGTCTTTGGAATCAGCATCAAGAATGAGGCACCTACTGGGGTTGCTTACACGTCGCAAAATCAATCAGTAGCAGCATTTGTAGGAGCAGATAAAGTAGCATTCTATCATTGTGCATTTTATAGCACTCACAATACTCTCTTTGATTATAAAGGCAGACATTACTATGATGAATGTTACATTCAAGGTTCTATTGATTTCATCTTTGGCCGTGGCAAATCCCTCTTCCATAAATGTGAGATATTTGTGATAGATGACAAGAGGACAGAGATAAGGGGGTCAATAACAGCACAAAATAGAGAGTCAGAAACAGAGCAAAGTGGGTTTGTGTTTGTGAAAGGGAAGGTATATGGCATAGGAGGGGTTTACTTAGGAAGAGCCAAGGGTTCTCATTCTAGGGTTATCTTTGCCAAAACCTATCTCTCTGCCACCATTGTTCCTGAAGGCTGGGCCCACTGGAGTTATGCTGGCTCCACGGAGCACTTATACCATGGCGAGTACAAGAACTTTGGTCCTGGAGCTAATACAACAAAACGAGCTAGTTGGGGCAAACAGCTCACTGAACAAGAAGTTGAACCCTTCATGTCTGTGGATTTCATCAATGGCAAGGATTGGCTTCCTGTTTGGCTATAA 1047 0.4097 MASSSSLLIIKPFLCFIVLFLAACPSYVLGIADLNDIVIDSPLLTKHIPTNRTIKVDDDGNGEFRSIQAAIDSIPEGNNEWVIVHVRKGVYREKVTIPKNKPYIFLRGNGRGKTAIVWSQSSVDNIDSATFKVEAHDVVVFGISIKNEAPTGVAYTSQNQSVAAFVGADKVAFYHCAFYSTHNTLFDYKGRHYYDECYIQGSIDFIFGRGKSLFHKCEIFVIDDKRTEIRGSITAQNRESETEQSGFVFVKGKVYGIGGVYLGRAKGSHSRVIFAKTYLSATIVPEGWAHWSYAGSTEHLYHGEYKNFGPGANTTKRASWGKQLTEQEVEPFMSVDFINGKDWLPVWL 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1371 348 Gene3D - 48 347 IPR012334 -
Mibi13g1371 348 FunFam Pectinesterase 48 348 - -
Mibi13g1371 348 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 47 344 - -
Mibi13g1371 348 ProSitePatterns Pectinesterase signature 2. 199 208 IPR033131 -
Mibi13g1371 348 Pfam Pectinesterase 54 340 IPR000070 GO:0030599|GO:0042545
Mibi13g1371 348 SUPERFAMILY Pectin lyase-like 49 346 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1371 Mibi-ChrMibi13 20308827 20311554 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1371 4 344 Carbohydrate Esterase AT5G47500 37.183 9.06e-75 233