LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi13g1361	ATGGAGAAGAATCACGAGAGAGAACCAGGCTTCAAGTCCTCTTCTTCTTCATCTGCCATGGAAACGACATTTTCCGATGACGTTCTGATGATTAACCAAGCTTCTTCTTTCTCCACCCTCTTCGAAACGTCACCGTTTGGGTCCTACGATCATCATCATCAACCTGAGGACAACAACAAAACTAATACTAATTACAGTCCCTTTGGGTTCATGGAATTGTTGGGTGTCCAAGATTATGCTCTTCCTACGCCTTCTTTGTTCGATTGCCTTCCCACCACCACCGCCACGGCGGCGACGTCTGTCGTGGCTGATGTAGCCGCCGACCGGACCCTGCCGTCGCCGGCTCCGGTGTCCCCGAATTCGTCGTCGCCTTCGTCATCCTCGAAGGAAGAACAGCAGAGTAGTAAAGCAGAGGATGAAGATTTGGAGGAGGATGGAGTAATTAGAGGAGACGACCAAGATGAACAAGACAAATCTAGTAAAGAACAGATGAAACCAAAGAAGAAGAAGCAGAAGAAGGAAAAGGAGGCAAGATTTGCATTCATGACCAAAAGCGAAGTTGATCACCTCGACGATGGTTATAGATGGCGCAAGTACGGCCAAAAAGCTGTCAAGAACAGCCCTTTTCCCAGGAGCTATTATAGGTGTACGACGGTTGGTTGTGGCGTCAAGAAGAGGGTGGAGCGGTCATCAGAAGACCCTTCCATCGTGGTAACGACGTACGAGGGGCAGCACAAGCACCTGAGCCCAACATCGGTGGCAACCCGGACCGGCCCGATCGGGTATAGCGGTGGTTTTGGTCCAATGAACTGGGTAGTCCCACAACCTTATGATCATCACAATCACCAATTTCAGCAGCAGGGCATGAATGTGTTGTCTTCATCGTCGTCATCATCATCATCACCATTTTTGTATAACTCAACAAGTAGCCACATGATGAATATGAACTCATCTACTAGGACGACGTCGTTTTTGAGGTCGTACCATGGCAGATCAGGTTTTGGAGAAGAAGTAGGGTATAAAATGGATAATGAAGCTAGTTTGTTATGTGACAATGGCCTTCTTCAGGACATTATCGTACCATCTCAGGTGATGATGATGAACAATGACGATCAAAAGCACTCTTAA	1128	0.4761	MEKNHEREPGFKSSSSSSAMETTFSDDVLMINQASSFSTLFETSPFGSYDHHHQPEDNNKTNTNYSPFGFMELLGVQDYALPTPSLFDCLPTTTATAATSVVADVAADRTLPSPAPVSPNSSSPSSSSKEEQQSSKAEDEDLEEDGVIRGDDQDEQDKSSKEQMKPKKKKQKKEKEARFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPFPRSYYRCTTVGCGVKKRVERSSEDPSIVVTTYEGQHKHLSPTSVATRTGPIGYSGGFGPMNWVVPQPYDHHNHQFQQQGMNVLSSSSSSSSSPFLYNSTSSHMMNMNSSTRTTSFLRSYHGRSGFGEEVGYKMDNEASLLCDNGLLQDIIVPSQVMMMNNDDQKHS	375

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi13g1361	375	ProSiteProfiles	WRKY domain profile.	185	250	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mibi13g1361	375	PANTHER	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	108	298	IPR044810	GO:0003700
	Mibi13g1361	375	MobiDBLite	consensus disorder prediction	114	131	-	-
	Mibi13g1361	375	FunFam	WRKY transcription factor 57	176	250	-	-
	Mibi13g1361	375	MobiDBLite	consensus disorder prediction	110	177	-	-
	Mibi13g1361	375	Pfam	WRKY DNA -binding domain	191	247	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mibi13g1361	375	SUPERFAMILY	WRKY DNA-binding domain	182	249	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Mibi13g1361	375	Gene3D	WRKY domain	177	243	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Mibi13g1361	375	SMART	WRKY_cls	190	249	IPR003657	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi13g1361	Mibi-ChrMibi13	20088776	20090605	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi13g1361	68	267	WRKY Transcription Factor Family	AT2G47260	50.224	4.21e-50	169

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Mibi13g1361		WRKY	1.9e-26	CL0274