Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1342 ATGAAGATTATTCTCTGTCTTCTGTCCCTTTGTTTCTACCCTTTAGCTATCCCGTTCATTAAAGCATCACAAATAAATGTAGAATCGTATGAACTTGATAGGGTGATTACCCTTCCTGGTCAACCATCAAGTCCCTCAGTCTCGCAATTTTCGGGTCATATCACTGTCAATGAAGCTCATGGGAGGGCTCTTTTCTACTGGTTCTTTGAAGCTCAATCAGAACCATCCAATAAGCCTCTCCTTCTCTGGCTCAATGGAGGACCTGGATGCTCCTCAATTGGTTATGGTGCGGTCGTTGAAATAGGACCTCTTACAGTCAATAAAAATGGTGAAGGACTTGATTCCAACCCCTATTCCTGGAATCAAGAGGCAAATTTGTTATTTGTCGAGTCACCAGTGGGAGTTGGTTTTTCTTACACCAACACATCTTCTGATCTCACCATATTAGAAGATAGCTTTGTGGCTGAGGATGCCTACAATTTCTTGGTAAATTGGCTGAAAAAGTTCCCACAATATAAATCTCGAGATTTTTTTATAGCAGGAGAGAGTTATGCTGGCCACTATATCCCTCAGCTGGCAGAGCTCATCTTTGATCGAAACAAAGACAGAGACAAATACTCATTTATCAATCTTAAAGGTTTTATTGTGGGGAATCCAGAAACCGAAAACTATTATGATTATAAAGGCCTTCTGGAATATGCATGGAGCCATGCAGTCATATCAGACCAAGAATATGACAATGCAAAAAATGTTTGTGATTTCAAGAAATTTGATTGGTCTGTGGAATGCAACAAGGCCATGAATGTGGTCTTCCGATATTACAAGGAAATAGATATTTACAACATTTATGCCCCAGCATGTCGCCTAAATAATACTGCCTCATCCATAGCTCTTGACAGCAATAATAGAGGCTTCGAATCAGTCCCAGAGGGGACAAATGATTACGGGCTGAGAAGGATGAGGCTTTTTGGAGGCTATGACCCTTGTTATTCCGCTTATGCTGAAGAATATTTCAATAGGATAGACGTTCAGTCATCTTTTCATGCTAATGTCAAAGGAGGAAACACTAGTGTGGCATGGAAGACTTGCAATGACTCCATATTAAATACATATAACTTCTCCGTTTTCTCTGTCCTTCCCATCTACACAAAACTCATCAAGGGTGGTCTCAAGGTGTGGATTTACAGTGGGGACACAGATGGCAGAATACCAGTGATAGGGACAAGATATTGCATTGAGGCTCTTGGATTGCCCCTCAAGTCTAGCTGGCGAACTTGGTACCATGATAATCAGGTGGGAGGAAGGATAGTGGAGTATGAAGGGCTAACATATGTGACAGTGAGAGGAGCTGGTCATTTGGTGCCACTCAACAAGCCTAGTGAGGCTCTTTCCCTCATTCATTCTTTCCTCACGGGACAGAACCTCCCTCCTCATCCATGA 1440 0.4208 MKIILCLLSLCFYPLAIPFIKASQINVESYELDRVITLPGQPSSPSVSQFSGHITVNEAHGRALFYWFFEAQSEPSNKPLLLWLNGGPGCSSIGYGAVVEIGPLTVNKNGEGLDSNPYSWNQEANLLFVESPVGVGFSYTNTSSDLTILEDSFVAEDAYNFLVNWLKKFPQYKSRDFFIAGESYAGHYIPQLAELIFDRNKDRDKYSFINLKGFIVGNPETENYYDYKGLLEYAWSHAVISDQEYDNAKNVCDFKKFDWSVECNKAMNVVFRYYKEIDIYNIYAPACRLNNTASSIALDSNNRGFESVPEGTNDYGLRRMRLFGGYDPCYSAYAEEYFNRIDVQSSFHANVKGGNTSVAWKTCNDSILNTYNFSVFSVLPIYTKLIKGGLKVWIYSGDTDGRIPVIGTRYCIEALGLPLKSSWRTWYHDNQVGGRIVEYEGLTYVTVRGAGHLVPLNKPSEALSLIHSFLTGQNLPPHP 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1342 479 FunFam Carboxypeptidase 327 475 - -
Mibi13g1342 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Mibi13g1342 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 190 IPR001563 GO:0004185|GO:0006508
Mibi13g1342 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Mibi13g1342 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 442 455 IPR001563 GO:0004185|GO:0006508
Mibi13g1342 479 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 36 459 IPR001563 GO:0004185|GO:0006508
Mibi13g1342 479 Pfam Serine carboxypeptidase 39 471 IPR001563 GO:0004185|GO:0006508
Mibi13g1342 479 SUPERFAMILY alpha/beta-Hydrolases 35 475 IPR029058 -
Mibi13g1342 479 ProSitePatterns Serine carboxypeptidases, serine active site. 179 186 IPR018202 GO:0004185
Mibi13g1342 479 Gene3D alpha/beta hydrolase 29 289 IPR029058 -
Mibi13g1342 479 FunFam Carboxypeptidase 378 472 - -
Mibi13g1342 479 FunFam Carboxypeptidase 29 289 - -
Mibi13g1342 479 ProSitePatterns Serine carboxypeptidases, histidine active site. 442 459 IPR033124 GO:0004185
Mibi13g1342 479 Gene3D - 329 367 - -
Mibi13g1342 479 Gene3D - 378 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1342 Mibi-ChrMibi13 19604282 19608528 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1342 360 475 Calmodulin-binding Proteins AT2G22960 32.479 6.11e-15 71.2