Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1341 ATGAATGCAACGTTTGGAGCAAAAATGCCTAGTTTAGTTGCATCCATGAATATTATTCTTTATTTTCTGTCCCTGTGTTTCTACCCTGCAGCTATTCTGATCATTGAAGCAACAGAAATAAATGCAGAACCTTATGAACATTATAGGGTAATTAATCTTCCTGGACAACCTTCAAGTCCATATGTCTCACAATTTTCAGGTTACATCACTGTCAATAAAGATCATGGGAGGGCCCTTTTCTACTGGTTCTTTGAAGCTCAATCTGAATCATCTAAGAAGCCTCTCCTACTCTGGCTTAATGGAGGTCCTGGATGCTCATCAATTGGTGCTGGTGCAGCTGTTGAGATTGGACCTCTTTCTGTCATAAAAAATGGTGAAGGGTTGCATTTCAACACCTATTCCTGGAATCGAGAGGCGAATTTGTTATTTGTGGAGTCACCAGTGGGAGTTGGTTTTTCTTACACCAATACATCTTCTGATCTCACCATATTAGAGGATAGTATTGTGGCTGAGGATTCCTACAATTTCTTGGTGAATTGGCTGCAAAGATTCCCACAGTTCAAATCTCGAGATTTCTTTATATCAGGAGAGAGTTATGCTGGTCATTACATCCCCCAGCTGGCAGAGCTCGTCTTTGATAGAAATAAAGATAGAAGCAAATACTCATTTATCAATCTTAAAGGATTTATTGTGGGGAATCCAGAGACTGAAGATTACTATGACTATACAGGCTTCCTGGAATATGCATCGAGCCATGCAGTAATATCAGATCTACAATATGAAAATGCAAAACAAGTCTGTGACTTTAAGCAATTTAATTGGTCTAAGGAATGCAATAAGGCCATGGAGGAAGTCTGGAATGAGTATTCAGAGATAGACATTTACAACATTTATGCACCGGCATGTCGGTTAAATAGCACCTCCTCTTCAGCTTATGGTAGTAAAAGTAGAAGATCCAAATCACTCTCTAAGGGGAGAAATGATTATAAACTAAGGATGATGGGAATTTTCGGTGGCTATGATCCATGTTATACCACAAATGTGGAAAAATATTTCAATAGGATTGATGTTCAGTCATCGTTTCATGCTGAAATCAAAGGAAGAAACACTAATTTTACGTGGAAGTCTTGCAGTAATTCCATATTAAATACATATAACTACTCCGTTTTCTCTGTCCTGCCCATCTACACAAAACTCATCAAGGGTGGACTCAAGGTGTGGGTTTACAGTGGGGACGCAGATGGTAGAATTCCAGTGATAGGGACGAGATATTGGATTGATGCTCTAGGATTGCCTCTCAAGTCTAGTTGGCGACCTTGGTACCATCATAATCAGGTGGGAGGAAGGATAGCGGAGTATGAAGGGCTAACATTTGTAACAATAAGAGGAGCAGGTCATTTGGTGCCACTCAACAAGCCTAGTGAGGCTCTTTCACTCATTCATTCTTTCCTTTCTGGGAAACATCTCCCTACTCATCCATGA 1482 0.4001 MNATFGAKMPSLVASMNIILYFLSLCFYPAAILIIEATEINAEPYEHYRVINLPGQPSSPYVSQFSGYITVNKDHGRALFYWFFEAQSESSKKPLLLWLNGGPGCSSIGAGAAVEIGPLSVIKNGEGLHFNTYSWNREANLLFVESPVGVGFSYTNTSSDLTILEDSIVAEDSYNFLVNWLQRFPQFKSRDFFISGESYAGHYIPQLAELVFDRNKDRSKYSFINLKGFIVGNPETEDYYDYTGFLEYASSHAVISDLQYENAKQVCDFKQFNWSKECNKAMEEVWNEYSEIDIYNIYAPACRLNSTSSSAYGSKSRRSKSLSKGRNDYKLRMMGIFGGYDPCYTTNVEKYFNRIDVQSSFHAEIKGRNTNFTWKSCSNSILNTYNYSVFSVLPIYTKLIKGGLKVWVYSGDADGRIPVIGTRYWIDALGLPLKSSWRPWYHHNQVGGRIAEYEGLTFVTIRGAGHLVPLNKPSEALSLIHSFLSGKHLPTHP 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1341 493 FunFam Carboxypeptidase 44 304 - -
Mibi13g1341 493 Gene3D alpha/beta hydrolase 45 304 IPR029058 -
Mibi13g1341 493 FunFam Carboxypeptidase 392 486 - -
Mibi13g1341 493 Pfam Serine carboxypeptidase 54 486 IPR001563 GO:0004185|GO:0006508
Mibi13g1341 493 ProSitePatterns Serine carboxypeptidases, histidine active site. 456 473 IPR033124 GO:0004185
Mibi13g1341 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 456 469 IPR001563 GO:0004185|GO:0006508
Mibi13g1341 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 144 154 IPR001563 GO:0004185|GO:0006508
Mibi13g1341 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 143 IPR001563 GO:0004185|GO:0006508
Mibi13g1341 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 180 205 IPR001563 GO:0004185|GO:0006508
Mibi13g1341 493 SUPERFAMILY alpha/beta-Hydrolases 50 489 IPR029058 -
Mibi13g1341 493 ProSitePatterns Serine carboxypeptidases, serine active site. 194 201 IPR018202 GO:0004185
Mibi13g1341 493 Gene3D - 343 381 - -
Mibi13g1341 493 FunFam Carboxypeptidase 339 489 - -
Mibi13g1341 493 Gene3D - 392 486 - -
Mibi13g1341 493 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 51 473 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1341 Mibi-ChrMibi13 19591566 19599063 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1341 374 489 Calmodulin-binding Proteins AT2G22960 32.479 1.04e-15 73.6