Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi13g1320 | ATGTCCAGTCTCTTCCCTCTCCCTCTGCCAAATACTTTCTCTAAGGAAGAATCTGAATCGGTTGATGGGAAAGATGTGAATCTGAATCCGTTAACGGCGATGATGATGCTTAGAAGTTGCTCTAGGCTTCGTTCTCTGGCTCGGCAAAGAGAATTTCCGTTGAAGCTTTGTAACCACCGTTTTTCGCTTCTCTCCGATCCAAGTCGCCGAGTTCCGTCTGCCCCTGTGAACATTATAGTTGGCTCTCATGTCTGGGTTGAAGATCCAGCACAAGCATGGATTGATGGGGAAGTTGTCAAAATCAACGGTGAAGAAGTCCATGTTTGCACCACAGATGGAAAGACAGTTGTCACAAATATGTCAAAGGTTTTTCCCAAGGATAATGAAGCTTCTCCTGGAGGTGTTGATGACATGACAAAACTGTCATATTTGCATGAGCCTGGAGTTCTGCACAACTTGGCAGCAAGATATGAGCTAAATGAAATCTATACGTATACTGGAAATATCCTGATTGCCATTAACCCATTTCAAAGATTACCCCATCTGTATGATACTCACATGATGGAACAGTACAAAGGAGCTGCCTTTGGAGAGTTGAGTCCCCATGTTTTTGCAGTTGCAGATGTTGCATACAGAGCAATGATCAATGAGGGCAAAAGCAACTCAATCTTGGTCAGTGGTGAAAGTGGTGCTGGTAAGACAGAGACAACAAAGATGCTCATGCGATATCTTGCTTACTTAGGGGGCCGGTCTGGAGTAGAAGGGCGGACAGTTGAACAGCAAGTTCTGGAATCTAATCCAGTTCTTGAAACATTTGGCAATGCAAAGACAGTTCGAAATAATAACTCTAGTCGTTTTGGTAAATTTGTTGAGATCCAATTTGACCACAAAGGAAGAATCTCAGGGGCAGCCATACGTACGTACTTGCTTGAGAGGTCTCGTGTTTGCCAAATTTCAGATCCTGAAAGAAATTACCATTGCTTTTACCTTCTATGTGCCGCCCCAGCTGAGGTAAAAGAGAAGTATAAGCTTGGAAGTCCTAGTTCCTTCCATTACTTAAATCAATCAAAGTGCTATGAATTGGATGGAGTGGATGATGCGGAGGAATATCTTACTACTCGAAGGGCAATGGATATTGTTGGAATTAGTGAGGAAGAACAGGAAGCAATTTTTAGGGTCGTGGCAGCTATTCTTCACCTTGGAAATATTGACTTCTCAAAGGGAGAGGAGATCGACTCTTCTGTCATCAAAGATGAGAAATCTAGATTCCATCTTAACACGACAGCTGAACTTCTTAAGTGTGATGCTAAGAGCTTGGAGGATGCATTGATCAAACGTGTGATGGTAACACCTGAGGAAGTTATTACAAGAACCCTAGATCCTATTGCAGCTGTTGGTAGCAGGGATGCATTGGCTAAAACCATTTATTCTCGCTTATTTGATTGGCTCGTGGAAAAAATTAACAATTCAATAGGGCAAGATCCTAATTCAAAATCTATCATTGGAGTTCTTGATATCTATGGATTTGAAAGTTTTAAATTCAACAGTTTTGAGCAGTTTTGTATTAATTTTACGAATGAAAAGCTGCAGCAACATTTTAATCAGCATGTCTTTAAAATGGAACAAGAAGAATACACCAAAGAAGAGATTGATTGGAGTTACATTGAGTTTATTGATAACCAAGATGTTTTGGATCTAATTGAAAAGAAACCTGGAGGAATAATAGCACTCCTTGATGAAGCCTGTATGTTTCCCAAGTCCACGCATGAAACATTTTCTCAGAAGTTGTACCAGACATTCAAAAACAACAAACGTTTTGTCAAACCCAAACTTTCTCGTACTAGTTTCACCATATGTCATTATGCAGGAGAGGTACTGTACCAGGCTGATATGTTTCTTGACAAAAACAAGGATTATGTGGTTGCAGAACATCAGGCTCTACTGACAGCCTCTAAATGCTTATTTGTGGCTGGTCTATTCCCACCTTCTCAAGAGGAGTCATCAAAATCATCCAAGTTCTCTTCAATTGGATCGCGCTTTAAGTTACAACTTCAATCTTTGATGGAGACCTTAAGTTCAACCGAGCCTCACTATATCAGATGTGTGAAACCAAACAATGTCCTCAAGCCTGCTATTTTTGAAAATGTCAACATTATCCAGCAATTACGCTGTGGTGGTGTGCTTGAAGCAATTAGAATCAGCTGTGCTGGATATCCTACTAGACGGACTTTTTATGAGTTTCTTAACCGATTCGGTGTTCTTGCCCCTGAAGTTTTGGAAGGAAACTTCGACGACAAAGTCGCATGCCAAAGAGTACTAGATAAAATGGGTTTGAAAGGCTACCAGATAGGCAAGACAAAGGTTTTCCTGAGAGCTGGTCAGATGGCTGAATTGGATGCAAGAAGAGCTGTGGTGCTTGGAAATGCTGCAAGAACTATCCAAAGACAAATACATACATATATTGCACGCAAGGAGTTCATTGATTTGCGGCAAGCTGCAATTTATTTGCAATCTAACTTGCGAGGCATATTAGCTCGGAAGCTGTTTGAGCATTTGCGGCGTGAAGCAGCAGCTGTGAAGATAGAGAAGAATTTCAGAGGACACATTGCAAGGAAATCTTACGTAATATCACGATCAGCTGCAATCACAATACAGACAGGATTAAGGGCTATGAAGGCTCGCGATGAATTTAGATTTAGAAAGCAAACAAAGGCTTCAATTCTCATACAGGCTCGCGTGCGTCAGCATGTTGCACATTCTTATTATAAAAGATTGCAGAAGGCTGCAATTGTTACTCAATGTGGTTGGAGACGAAGGGTTGCTAGGAGGGAACTCAGAAAACTTAAAATGGCTGCAAGAGAAACAGGGGCTCTTCAAGAAGCAAAGAACAAACTAGAAAAGCGTGTTGAAGAACTTACATGGCGTTTACAAATTGAGAAGCGTTTGAGAAGTGACTTGGAAGAGGAGAAGACACAAGAAATTGCTAAGCTAAAGGATGCATTGCATGCGATGCAAATACAAGTAGAAGAAGCAAATGCCAAAGTCCTCAAAGAACGTGAATCAGCTCGTAAGGCAATTGAAGAAGCACCCCCAGTTATCAAGGAGACTCCTGTTATAATTCAGGATACCGAAAAGCTTAATTCCTTAATGGCTGAGGTCAATAGTTTGAAGGAGTCTCTGATAACAGAAAGAAAGGCTAAAGAAGAGGCCAGGAAAGGTCATGCAGATGCTGATGCTAGAAATGCTGAACTGGTTAAGAAAGTAGAAGATTCTAGTCGCAAAGTGGATCAACTTCAGGAACTGGTTCAGAGATTGGAAGAGAAAATATCCAATTCAGAGTCTGAAAACCAAGTTCTTCGCCAGCAAGCATTGGCTGTCTCGCCAACTGGAAAAGCTCTATCTGCAAGACCAAGGACTGTGATTATACAGAGGACACCGGAAAATGGGAATGCTTTAAATGGAGAATCAAAACCTGTTACAGACATGGCTCTTGCTGTATCCAATGTACGTGAACCGGAATCTGAGGGAAAGCCACAAAAGTCTCTCAACGAGAAACAGCAAGAAAACCAGGACTTGTTGATCAAGTGTATATCACAAGATTTGGGATTTTCCGGGGGCAAACCTGTTGCTGCATGCATGATCTATAAATGCCTTCTTCACTGGAGATCATTTGAAGTTGAAAGAACAACTGTTTTTGACCGTATCATTCAAACAATATCTTCAGCAGTTGAGGGGCAGGATAATGCTGATATATCAGCCTACTGGTTGTCTAATACATCAACTTTGTTGTTCCTTCTCCAACGAACTCTCAAGGCAAGTGGGGCAGCTAGCTTAACACCACAAAGGCGGAGAACAGCCTCAGCTTCTCTGTTTGGAAGAATGTCTCAAGGGCTAAGGGCATCTCCTCAAAGCGCTGGTTTACCATTTCTAAATGGTAGAGGGCTCAGTAGACTGGATGATTTAAGGCAAGTGGAAGCAAAATACCCCGCTCTGCTGTTCAAGCAGCACCTTACTGCCTTCCTGGAAAAAATATATGGAACGATAAGAGACAACCTTAAGAAAGAGATATCTCCATTACTCGGATTGTGTATCCAGGCTCCAAGGACTTCACGTCAAGGTTTAGTGAAAGGACGCTCACATGCTAATGCAATTGCCCAACAAGCTTTGATTGCTCACTGGCAAAAAATTGTGAGCAGCTTAAACAACTCTCTGAAGATAATGAAAGCAAACTATGTGCCCCCATTCTTGGTCTGTAAAGTGTTTACCCAAATATTCTCATTCATTAATGTTCAACTATTCAACAGTCTTCTGTTGCGTCGTGAGTGTTGTTCATTCAGTAATGGGGAGTACGTAAAGACAGGTTTGGCTGAATTAGAGCAGTGGTGCAATGAGGCCACAGAGGAGTATGTTGGTTCAGCTTGGGAGGAATTGAAGCATATCAGGCAGGCTGTTGGGTTCCTGGTGATACATCAAAAACCCAAGAAGACCTTGAATGAAATAACAAAGGAGCTTTGCCCTGTTCTTAGCATACAACAGTTATACAGGATCAGTACAATGTACTGGGATGATAAATATGGCACGCACAGTGTGTCTACAGATGTTATAGCAAAAATGAGAGTGATGATGGCTGAAGACTCTGGCAATGCTGTAAGCAGCTCCTTCCTACTGGATGACGACTCAAGCATACCATTCTCAGTAGATGACATCTCTAAATCCATTCAACAAGTGGATGTGTCTGATGTGGATCCTCCTCCATTGATCCGTGAGAACTCAGGATTTGGGTTCCTTCTAGCGCGGTCAGAGTGA | 4806 | 0.4189 | MSSLFPLPLPNTFSKEESESVDGKDVNLNPLTAMMMLRSCSRLRSLARQREFPLKLCNHRFSLLSDPSRRVPSAPVNIIVGSHVWVEDPAQAWIDGEVVKINGEEVHVCTTDGKTVVTNMSKVFPKDNEASPGGVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAAFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLETFGNAKTVRNNNSSRFGKFVEIQFDHKGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPAEVKEKYKLGSPSSFHYLNQSKCYELDGVDDAEEYLTTRRAMDIVGISEEEQEAIFRVVAAILHLGNIDFSKGEEIDSSVIKDEKSRFHLNTTAELLKCDAKSLEDALIKRVMVTPEEVITRTLDPIAAVGSRDALAKTIYSRLFDWLVEKINNSIGQDPNSKSIIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLYQTFKNNKRFVKPKLSRTSFTICHYAGEVLYQADMFLDKNKDYVVAEHQALLTASKCLFVAGLFPPSQEESSKSSKFSSIGSRFKLQLQSLMETLSSTEPHYIRCVKPNNVLKPAIFENVNIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLNRFGVLAPEVLEGNFDDKVACQRVLDKMGLKGYQIGKTKVFLRAGQMAELDARRAVVLGNAARTIQRQIHTYIARKEFIDLRQAAIYLQSNLRGILARKLFEHLRREAAAVKIEKNFRGHIARKSYVISRSAAITIQTGLRAMKARDEFRFRKQTKASILIQARVRQHVAHSYYKRLQKAAIVTQCGWRRRVARRELRKLKMAARETGALQEAKNKLEKRVEELTWRLQIEKRLRSDLEEEKTQEIAKLKDALHAMQIQVEEANAKVLKERESARKAIEEAPPVIKETPVIIQDTEKLNSLMAEVNSLKESLITERKAKEEARKGHADADARNAELVKKVEDSSRKVDQLQELVQRLEEKISNSESENQVLRQQALAVSPTGKALSARPRTVIIQRTPENGNALNGESKPVTDMALAVSNVREPESEGKPQKSLNEKQQENQDLLIKCISQDLGFSGGKPVAACMIYKCLLHWRSFEVERTTVFDRIIQTISSAVEGQDNADISAYWLSNTSTLLFLLQRTLKASGAASLTPQRRRTASASLFGRMSQGLRASPQSAGLPFLNGRGLSRLDDLRQVEAKYPALLFKQHLTAFLEKIYGTIRDNLKKEISPLLGLCIQAPRTSRQGLVKGRSHANAIAQQALIAHWQKIVSSLNNSLKIMKANYVPPFLVCKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKTGLAELEQWCNEATEEYVGSAWEELKHIRQAVGFLVIHQKPKKTLNEITKELCPVLSIQQLYRISTMYWDDKYGTHSVSTDVIAKMRVMMAEDSGNAVSSSFLLDDDSSIPFSVDDISKSIQQVDVSDVDPPPLIRENSGFGFLLARSE | 1601 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi13g1320 | 1601 | FunFam | unconventional myosin-Va | 808 | 856 | - | - | |
| Mibi13g1320 | 1601 | Pfam | IQ calmodulin-binding motif | 878 | 898 | IPR000048 | GO:0005515 | |
| Mibi13g1320 | 1601 | Pfam | IQ calmodulin-binding motif | 830 | 849 | IPR000048 | GO:0005515 | |
| Mibi13g1320 | 1601 | Pfam | IQ calmodulin-binding motif | 927 | 946 | IPR000048 | GO:0005515 | |
| Mibi13g1320 | 1601 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 383 | 672 | - | - | |
| Mibi13g1320 | 1601 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
| Mibi13g1320 | 1601 | FunFam | Myosin XI D | 738 | 801 | - | - | |
| Mibi13g1320 | 1601 | Pfam | Myosin head (motor domain) | 135 | 791 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Mibi13g1320 | 1601 | SMART | iq_5 | 901 | 923 | IPR000048 | GO:0005515 | |
| Mibi13g1320 | 1601 | SMART | iq_5 | 853 | 875 | IPR000048 | GO:0005515 | |
| Mibi13g1320 | 1601 | SMART | iq_5 | 924 | 946 | IPR000048 | GO:0005515 | |
| Mibi13g1320 | 1601 | SMART | iq_5 | 805 | 827 | IPR000048 | GO:0005515 | |
| Mibi13g1320 | 1601 | SMART | iq_5 | 828 | 850 | IPR000048 | GO:0005515 | |
| Mibi13g1320 | 1601 | SMART | iq_5 | 876 | 898 | IPR000048 | GO:0005515 | |
| Mibi13g1320 | 1601 | Coils | Coil | 1081 | 1122 | - | - | |
| Mibi13g1320 | 1601 | FunFam | Class V myosin | 510 | 655 | - | - | |
| Mibi13g1320 | 1601 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 104 | 856 | IPR027417 | - | |
| Mibi13g1320 | 1601 | CDD | MyosinXI_CBD | 1184 | 1567 | IPR037975 | GO:0007015 | |
| Mibi13g1320 | 1601 | PANTHER | MYOSIN | 129 | 1532 | - | - | |
| Mibi13g1320 | 1601 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 79 | 128 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Mibi13g1320 | 1601 | ProSiteProfiles | Dilute domain profile. | 1233 | 1544 | IPR002710 | - | |
| Mibi13g1320 | 1601 | Gene3D | - | 510 | 694 | - | - | |
| Mibi13g1320 | 1601 | Gene3D | - | 323 | 381 | - | - | |
| Mibi13g1320 | 1601 | SMART | DIL_2 | 1419 | 1526 | IPR002710 | - | |
| Mibi13g1320 | 1601 | Gene3D | - | 738 | 804 | - | - | |
| Mibi13g1320 | 1601 | FunFam | unconventional myosin-Va | 857 | 904 | - | - | |
| Mibi13g1320 | 1601 | Pfam | Myosin N-terminal SH3-like domain | 80 | 119 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Mibi13g1320 | 1601 | ProSiteProfiles | IQ motif profile. | 925 | 954 | IPR000048 | GO:0005515 | |
| Mibi13g1320 | 1601 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 856 | 954 | IPR027417 | - | |
| Mibi13g1320 | 1601 | Coils | Coil | 948 | 1028 | - | - | |
| Mibi13g1320 | 1601 | ProSiteProfiles | IQ motif profile. | 902 | 928 | IPR000048 | GO:0005515 | |
| Mibi13g1320 | 1601 | PRINTS | Myosin heavy chain signature | 220 | 245 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Mibi13g1320 | 1601 | PRINTS | Myosin heavy chain signature | 553 | 581 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Mibi13g1320 | 1601 | PRINTS | Myosin heavy chain signature | 163 | 182 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Mibi13g1320 | 1601 | PRINTS | Myosin heavy chain signature | 267 | 294 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Mibi13g1320 | 1601 | PRINTS | Myosin heavy chain signature | 500 | 528 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Mibi13g1320 | 1601 | ProSiteProfiles | IQ motif profile. | 877 | 906 | IPR000048 | GO:0005515 | |
| Mibi13g1320 | 1601 | FunFam | Myosin 2 | 383 | 498 | - | - | |
| Mibi13g1320 | 1601 | ProSiteProfiles | Myosin motor domain profile. | 133 | 803 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Mibi13g1320 | 1601 | FunFam | Myosin heavy chain | 323 | 378 | - | - | |
| Mibi13g1320 | 1601 | CDD | MYSc_Myo11 | 147 | 791 | IPR036018 | - | |
| Mibi13g1320 | 1601 | Gene3D | - | 82 | 126 | IPR008989 | GO:0003774|GO:0005524|GO:0051015 | |
| Mibi13g1320 | 1601 | Gene3D | Kinesin motor domain | 136 | 733 | IPR036961 | - | |
| Mibi13g1320 | 1601 | ProSiteProfiles | IQ motif profile. | 829 | 858 | IPR000048 | GO:0005515 | |
| Mibi13g1320 | 1601 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
| Mibi13g1320 | 1601 | FunFam | unconventional myosin-Va | 905 | 952 | - | - | |
| Mibi13g1320 | 1601 | Pfam | DIL domain | 1420 | 1523 | IPR002710 | - | |
| Mibi13g1320 | 1601 | ProSiteProfiles | IQ motif profile. | 854 | 883 | IPR000048 | GO:0005515 | |
| Mibi13g1320 | 1601 | SMART | MYSc_2a | 127 | 804 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Mibi13g1320 | 1601 | Gene3D | - | 857 | 903 | - | - | |
| Mibi13g1320 | 1601 | Gene3D | - | 904 | 953 | - | - | |
| Mibi13g1320 | 1601 | Gene3D | - | 806 | 856 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi13g1320 | Mibi-ChrMibi13 | 19144710 | 19163601 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi13g1320 | 138 | 1601 | Myosins gene family | AT5G20490 | 81.899 | 0.0 | 2499 |