Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1314 ATGAAAAAAGGAAGTTTAGAGCCAAATCTTAAACTCACTGTTCCTGATTCTTTCGCCAAGTACTTGACTGAGAGTGGAACCTTCAGGGAGGGTGATCTTCTGGTGAATAAGTTTGGAGTTCGGATTATCTCTCAGAATGAAGTTGAAGCTCCACCCCCTATCAGAGCACTAGACAACGAGTTAAGGTTAGAAGACATAGACGCAATCAAAGTGGTTGGAAAGGGAAGCGGTGGTACTGTGCAATTGGTGCAGCACAAATGGACTAATCAGTTTTTTGCATTGAAGGTGATTCAAATGACTATTGACGAGCCTATGTGCAAGCAGATAGCAAAGGAGCTGAAAATCAATCAATCAGCTCAATGTCCCTATGTTGTTGTCTGTTACCAATCCTTTTATGAAAATAATGTTATATCAATCGTCTTAGAGTACATGGATGGAGGGTCTCTGGAAGATTTTCTGAAGAAAGTTAAATCAATTCCAGAGCCACATCTTGCTGCCATTTGCAAGCAGGTGCTGAAGGGTTTAACTTATCTTCACCATGAAAAACATATTATTCACAGGGACTTGAAGCCTTCCAATTTGTTGATAAATCACAGAGGGGAAGTAAAGATCACTGACTTTGGGGTCAGTGCAATCATGGAAAGTACATCTGGTCAAGCTAACACTTTCATTGGAACACGTATCTATATGTCTCCTGAGAGGATCAATGGATTCCAGCCTGGCTACAACTACAAATGTGACATATGGAGTTTGGGACTGATATTGCTTGAGTGTGCTACAGGGAGGTTTCCATATACACCTCCTGATCAATGTGGAAGATGGGAAAATGTATTTCAGCTTATTGAAGCTGTTGTTGAGGGTCCTCCTCCCTCTGCTCCACCTGATCAATTTACTCCAGAGTTCTGCTCATTTGTTTCATCTTGTTTGCAGAAAAATCCAAGGAATAGGTTGTCAGCCCAAGAACTTTTGAGACATCCATTTATCAATATGTACGAGGACTTAGATGTGGATCTTTCAGCTTACTTCTACAATGCAGGATCTCCCCTTGCTACTTTATAG 1059 0.4108 MKKGSLEPNLKLTVPDSFAKYLTESGTFREGDLLVNKFGVRIISQNEVEAPPPIRALDNELRLEDIDAIKVVGKGSGGTVQLVQHKWTNQFFALKVIQMTIDEPMCKQIAKELKINQSAQCPYVVVCYQSFYENNVISIVLEYMDGGSLEDFLKKVKSIPEPHLAAICKQVLKGLTYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMESTSGQANTFIGTRIYMSPERINGFQPGYNYKCDIWSLGLILLECATGRFPYTPPDQCGRWENVFQLIEAVVEGPPPSAPPDQFTPEFCSFVSSCLQKNPRNRLSAQELLRHPFINMYEDLDVDLSAYFYNAGSPLATL 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1314 352 SUPERFAMILY Protein kinase-like (PK-like) 58 335 IPR011009 -
Mibi13g1314 352 SMART serkin_6 66 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g1314 352 FunFam Mitogen-activated protein kinase kinase 6 36 145 - -
Mibi13g1314 352 ProSitePatterns Protein kinases ATP-binding region signature. 72 95 IPR017441 GO:0005524
Mibi13g1314 352 Gene3D Phosphorylase Kinase; domain 1 44 145 - -
Mibi13g1314 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Mibi13g1314 352 FunFam Mitogen-activated protein kinase kinase 6 147 347 - -
Mibi13g1314 352 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 59 341 - -
Mibi13g1314 352 CDD PKc_MAPKK_plant_like 64 332 - -
Mibi13g1314 352 Gene3D Transferase(Phosphotransferase) domain 1 146 347 - -
Mibi13g1314 352 ProSiteProfiles Protein kinase domain profile. 66 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g1314 352 Pfam Protein kinase domain 69 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1314 Mibi-ChrMibi13 19052717 19056034 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1314 23 350 MAP Kinase Kinase Gene Family AT4G26070 64.048 1.73e-161 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Mibi13g1314 Pkinase 4.1e-69 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi13g1314 13 19052717 19056034 Mibi13g1314 13 19052717 19056034 ECH