Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1299 ATGATGTTTAGTTCAGAGGAAATGAAAATGGTGAACGCTGATCTTCCTGAAGAAATTGTGGAAGAGATATCAAAGAGGCTTCCAGTGAAATCCCTACTTCGATTCAAATCCGTAGCAAAATCCTGGTACGCACGAATCACTGATCCATATTTTATTACTAGACAAATTGAATGGTCCAACTCGATTACAGAAAATCGAAGATTCCAGTTCATTTTTAGATTGGACATTGTCACTATGAAGCCATGTATTTCTCTGATTTCTCCTGATGGAGAACCTAATGATGTTGAATTGCCATTTCCTGAGGATAAGGATGTGGAATACATATTTTCTTATGGTCAATGTAATGGGGTTTTCTGTCTTAATGGGGTTTATGGAGGAGAGAAATCTGGTGAAACGAGTTTGATTCTGTGGAATCCAGGAACAAAAGAGGTTAGGGTTATTCCTGAATCTTTGAACAAACCCAAAGACATGGTTTATATCATATTTGGGTTTGGGATTGATCCTATTACAAAGGATTATAAGGTTGTTAGATTTGGGAATTTGGATCTTCAAGGTGGAGAACTACCTCCAGTTGAGGTGTATAATCTTAGCACTAATTCTTGGAGAACCATAGATGTTGTTGTCCCTGCTTCTAGATTGTGTTATCCAAAATGTAAGGCTTACTTGAATGGATTTTATCACTGGTTGATTGATGATGATGATAACAATGATAAGGCCATTTTGTTCTTTGATTTTAGTAAGGAAGTGTTTGGGAAGATTCAGTTGCCTCCTAGACTTGATCAGTCTCATGAATCAAGTGTAGCTGTGATTGATGAGAAGCTAGCTTGTATTGCTACATATAAAGTGGGGGCACATTATGCATTTGAAATATGGGTGATGAATGAGTATGGTGTTGGGAGTAGCTGGATTAAGAAATCTGTCATTAGTCCACGCCCTGAGTTTGGATCATTTTTAGGATTTGGGGGAGATAATAATGAGATTCTTGTTGATGATGGTGGTCAATTGGTTTCATATAATCTTAAGAATCAGCAAATTAAAAAGTTGGAAATATATGGAGTTCCAACACTGATGAAGGCGTTTGGCTATTTGGAAAGCTTGGTTCCTATGAAGAACTAA 1116 0.371 MMFSSEEMKMVNADLPEEIVEEISKRLPVKSLLRFKSVAKSWYARITDPYFITRQIEWSNSITENRRFQFIFRLDIVTMKPCISLISPDGEPNDVELPFPEDKDVEYIFSYGQCNGVFCLNGVYGGEKSGETSLILWNPGTKEVRVIPESLNKPKDMVYIIFGFGIDPITKDYKVVRFGNLDLQGGELPPVEVYNLSTNSWRTIDVVVPASRLCYPKCKAYLNGFYHWLIDDDDNNDKAILFFDFSKEVFGKIQLPPRLDQSHESSVAVIDEKLACIATYKVGAHYAFEIWVMNEYGVGSSWIKKSVISPRPEFGSFLGFGGDNNEILVDDGGQLVSYNLKNQQIKKLEIYGVPTLMKAFGYLESLVPMKN 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1299 371 TIGRFAM F_box_assoc_1: F-box protein interaction domain 112 326 IPR017451 -
Mibi13g1299 371 Pfam F-box associated 221 344 IPR006527 -
Mibi13g1299 371 Gene3D - 13 51 - -
Mibi13g1299 371 PANTHER BNACNNG10540D PROTEIN 9 317 - -
Mibi13g1299 371 SUPERFAMILY F-box domain 14 63 IPR036047 GO:0005515
Mibi13g1299 371 SMART fbox_2 15 54 IPR001810 GO:0005515
Mibi13g1299 371 Pfam F-box domain 14 51 IPR001810 GO:0005515
Mibi13g1299 371 SUPERFAMILY Galactose oxidase, central domain 123 348 IPR011043 -
Mibi13g1299 371 ProSiteProfiles F-box domain profile. 9 56 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1299 Mibi-ChrMibi13 18838563 18839678 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1299 192 362 Carbohydrate Esterase AT1G25141 24.719 2.43e-07 49.3