Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1290 ATGTTCCAGCATGTGGTGTACCTGAAGTGCAGAGATCCAGTGTGGGACGACGCAGAGTATGTGGATACATCTCCATGTGTGAATTGGGAATCCAAAGGAGGAGGCTATCTTTATGCTGTGGCTGGGGACTTATTGGCTGGCCAGTTGAAATCTGATTGTCATGTGAAATGGGTGGCCACCATAGCCTCAGATTGGTACTCATTGGTGGGTGGTGGTGGTGGTGGAAGAATAAAGTCATACTCTGATATTCACAGAGTGATTTCCTTCGGATTTGAGCTTTCATGGTGGCAACGGGCTTGTGTTGATTTCAAATGCCCAACTGATCATAGATGCGATTTGGACTCTGAAACTCTCACTCTCCGATGCGTTCAGCTTTATCATCAATGTGATAGTCCCATGGGAATAACTAGCAGAGAAGCATGTAGTAATTTTTCAAAGCTGCGCATATCGGCAGAAGATTATCTTTATGGAATGCAAAAAGGACTGTTCCAAATAGCAAGGAAGGGTATACCCCCTCACCACCATGACACGGATTTTATTCTAACAACTCCTGCAATCAAATTGGGTTTAATTACAGCAAAAGGTGTTGTGCCTTACATCCTAGCCAGATTTTTAATTGGTATCGTATTTCTATTTATGTTGTTGATTTATACATGCCGGAGAAGGCACATGTCAATGTTCGAAAACATCGAGGATTTTATAAGACTTCATGACCTCATTCCAATAAGGTACTCCTACAAGGATTTGAAGACGATGACCAATGGTTTCAGCAATAAGTTAGGTGAAGGAGGATTCGGCACTGTATACAAAGGGACGTTAAGGAGTGGATATGATGTTGCTATCAAAATGTTGGGTAAATCTAAAGCCAATGGCCAAGAATTCATCAGTGAAGTGGCAACTATTGGTAGGATACACCATTTTAATGTGGTACACCTTGTTGGATTCTGCGTGGAAGGAACAAAGAGAGCTCTTGTCTATGATTTCATGTCTAATGGATCATTGGATAAATATATATTTTCTAAACAAGAAAGTATCTCATTGAGTTATCACAAGATATATGAGATATCTCTTGGAGTAGCTCGTGGGATTGCTTACCTTCATCATGGATGTGATATGCAAATATTGCATTTTGATATTAAGCCCCACAACATTCTTCTTGACGAAAACTTCACTCCGAAGATTTCAGATTTCGGATTAGCAAGATTATATTCTGCTGATGATAGTATTGTCACTTTGACAGCTGCAAGAGGCACAATAGGATACATGGCTCCAGAATTATTCTATAAGAATATTGGGGGAGTGTCCTACAAGGCCGATATTTATAGCTTCGGAATGCTTTTGATGGAAATGGCTAGTCGAAGAAGGAACTTGAATCCACATGCTGAACATTCAAGCCAACTTTACTTTCCTTTGTGGATTTATGACCAATTTGATGAAGATAAAGATATAGAAATGGATGATTTGACAGAAGAGGAGAAGGACTTAACAAAGAAAATGTTCATAGTGGCACTATGGTGTATACAACTAAAGCCTGCAGATCGCCCTTCAATGAGCAAAGTAATAGAAATGCTAGAAGCAAATGATGTTGAAAGTCTTGAAATGCCTCCAAAACCTTCTTTATATCCTAACGAAGAAGTTTTGTTGGATCATGAATCCTCCTCTAAACAGGAAACATCCACTATCTCTATACATTCTCATAGTAGTTCAGGTGATCAAGGCACCAGTAGTGGAAAATAA 1737 0.3967 MFQHVVYLKCRDPVWDDAEYVDTSPCVNWESKGGGYLYAVAGDLLAGQLKSDCHVKWVATIASDWYSLVGGGGGGRIKSYSDIHRVISFGFELSWWQRACVDFKCPTDHRCDLDSETLTLRCVQLYHQCDSPMGITSREACSNFSKLRISAEDYLYGMQKGLFQIARKGIPPHHHDTDFILTTPAIKLGLITAKGVVPYILARFLIGIVFLFMLLIYTCRRRHMSMFENIEDFIRLHDLIPIRYSYKDLKTMTNGFSNKLGEGGFGTVYKGTLRSGYDVAIKMLGKSKANGQEFISEVATIGRIHHFNVVHLVGFCVEGTKRALVYDFMSNGSLDKYIFSKQESISLSYHKIYEISLGVARGIAYLHHGCDMQILHFDIKPHNILLDENFTPKISDFGLARLYSADDSIVTLTAARGTIGYMAPELFYKNIGGVSYKADIYSFGMLLMEMASRRRNLNPHAEHSSQLYFPLWIYDQFDEDKDIEMDDLTEEEKDLTKKMFIVALWCIQLKPADRPSMSKVIEMLEANDVESLEMPPKPSLYPNEEVLLDHESSSKQETSTISIHSHSSSGDQGTSSGK 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1290 578 Gene3D Phosphorylase Kinase; domain 1 220 328 - -
Mibi13g1290 578 SMART serkin_6 254 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g1290 578 SUPERFAMILY Protein kinase-like (PK-like) 239 525 IPR011009 -
Mibi13g1290 578 FunFam PR5-like receptor kinase 329 536 - -
Mibi13g1290 578 CDD STKc_IRAK 260 525 - -
Mibi13g1290 578 Gene3D Transferase(Phosphotransferase) domain 1 329 534 - -
Mibi13g1290 578 ProSiteProfiles Protein kinase domain profile. 254 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g1290 578 FunFam serine/threonine-protein kinase PBS1-like 224 328 - -
Mibi13g1290 578 ProSitePatterns Serine/Threonine protein kinases active-site signature. 374 386 IPR008271 GO:0004672|GO:0006468
Mibi13g1290 578 PANTHER RUST RESISTANCE KINASE LR10-RELATED 226 552 IPR045874 GO:0004672
Mibi13g1290 578 MobiDBLite consensus disorder prediction 553 578 - -
Mibi13g1290 578 Pfam Protein tyrosine and serine/threonine kinase 257 524 IPR001245 GO:0004672|GO:0006468
Mibi13g1290 578 ProSitePatterns Protein kinases ATP-binding region signature. 260 282 IPR017441 GO:0005524
Mibi13g1290 578 MobiDBLite consensus disorder prediction 532 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1290 Mibi-ChrMibi13 18332407 18338927 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1290 243 572 Receptor kinase-like Gene Family AT5G38280 50.448 8.76e-110 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mibi13g1290 PK_Tyr_Ser-Thr 5e-48 CL0016