Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1284 ATGTTGGAGCACGTGGTGTACCTGAAGTGCAGGGATCCAGTGAGGGACGATGCAGCGTACGTGGATACATCTCCATGTGTGACTTGGGAAGAAAAAGGAGAAGGAGGAGGAGGCTATCTTTATGCGGTGGCCGGAGACTTGACGGCTGACCGGTTAAAATCTGAGTGTCATGTGAAATGGGTGGCGACCATAGCTTCAGATTGGGAATCAATGGTGCGTGGCGGTGGTGGTGGAAGAATCAAGTCATACTCTGATCTTCACAGAGTGATTTCGTATGGATTTGAGGTTTCATGGTGGCGACGAGCTTGTGCTGATATTGAATGCCCACGTGATAGTACATGCTATTTCTTCGACCAAGAAAATATCAGTCTCGGATGCGAGGCGTCTGATAACTGCAAAAGTCCCACGGGGATAACTACGCGTTCAAAATGTAGTGACTTTTCAAAGCTGCGCACATTGGTAGAAGATTATATTTATGGAATGGAAAGAGGAGTGTTCCAAATTGCAAGGAAGAGTATATACGATCACCGCAATGGAACAGATATTTTTCTAACAAATGCTGCAATTAAATTGGGAATAATTACTGGAATAGGTGTTGTGCCATACATCACAGTCAGATTTTTAATTGGCATTGTATTACTAATCATATTATTGATTTATACATGCCGGAGAAGGCACATGTCAATGTTCGAAAATATCGAGGATTTTATAAGACTTCATGACCTCATTCCAATAAGGTACTCCTACAAGGATTTGAAGACGATGACCAATGGTTTCAGCAATAAGTTAGGTGAAGGAGGATTCGGCACTGTATACAAAGGGACGTTAAGGAGTGGATATGATGTTGCTATCAAAATGTTGGGTAAATCTAAAGCCAATGGCCAAGAATTCATCAGTGAAGTGGCAACTATTGGTAGGATACACCATTTTAATGTGGTACACCTTGTTGGATTCTGCGTGGAAGGAACAAAGAGAGCTCTTGTCTATGATTTCATGTCTAATGGATCATTGGATAAATATATATTTTCTAAACAGGAAAGTATCTCATTGAGTTATCACAAGATATATGAGATATCTCTTGGAGTAGCTCGTGGGATTGCTTATCTTCATCATGGATGTGATATGCAAATATTGCATTTTGATATTAAGCCCCACAACATTCTTCTTGACGAAAACTTCACTCCAAAGATTTCAGATTTCGGACTGGCAAGATTATATTCTGCTGATGATAGTATTGTCACTTTGACAGCAGCAAGAGGCACAATAGGATACATGGCTCCAGAATTATTCTATAAGAATATTGGGGGAGTGTCCTACAAGGCCGATATTTATAGCTTCGGAATGCTTTTGATGGAAATGGCTAGTCGAAGAAGGAACTTGAATCCACATGCTGAACATTCAAGCCAACTTTACTTTCCTTTGTGGATTTATGACCAATTTGATGAAGATAAAGATATAGAAATGGAAGATTTGACAGAAGAGGAGAAGGACTTAACAAAGAAAATGTTCATAGTGGCACTATGGTGTATACAACTAAAGCCTGCAGATCGCCCTTCAATGAGCAAAGTAATAGAAATGCTAGAAGCAAATGATGTTGAAAGTCTTGAAATGCCTCCGAAACCTTCTTTATATCCTAATGAAGAAGTTTTGTTGGATCATGAATCCTCCTCTAAACAGGAAACATCCACTATCTCTATTCATTCTCACAGCAGTTCAGGTGATGATGAAGGCACAAGTAGTGGAAAATAA 1749 0.3991 MLEHVVYLKCRDPVRDDAAYVDTSPCVTWEEKGEGGGGYLYAVAGDLTADRLKSECHVKWVATIASDWESMVRGGGGGRIKSYSDLHRVISYGFEVSWWRRACADIECPRDSTCYFFDQENISLGCEASDNCKSPTGITTRSKCSDFSKLRTLVEDYIYGMERGVFQIARKSIYDHRNGTDIFLTNAAIKLGIITGIGVVPYITVRFLIGIVLLIILLIYTCRRRHMSMFENIEDFIRLHDLIPIRYSYKDLKTMTNGFSNKLGEGGFGTVYKGTLRSGYDVAIKMLGKSKANGQEFISEVATIGRIHHFNVVHLVGFCVEGTKRALVYDFMSNGSLDKYIFSKQESISLSYHKIYEISLGVARGIAYLHHGCDMQILHFDIKPHNILLDENFTPKISDFGLARLYSADDSIVTLTAARGTIGYMAPELFYKNIGGVSYKADIYSFGMLLMEMASRRRNLNPHAEHSSQLYFPLWIYDQFDEDKDIEMEDLTEEEKDLTKKMFIVALWCIQLKPADRPSMSKVIEMLEANDVESLEMPPKPSLYPNEEVLLDHESSSKQETSTISIHSHSSSGDDEGTSSGK 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1284 582 ProSiteProfiles Protein kinase domain profile. 257 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g1284 582 MobiDBLite consensus disorder prediction 535 582 - -
Mibi13g1284 582 SUPERFAMILY Protein kinase-like (PK-like) 242 528 IPR011009 -
Mibi13g1284 582 ProSitePatterns Protein kinases ATP-binding region signature. 263 285 IPR017441 GO:0005524
Mibi13g1284 582 PANTHER RUST RESISTANCE KINASE LR10-RELATED 231 555 IPR045874 GO:0004672
Mibi13g1284 582 Gene3D Phosphorylase Kinase; domain 1 223 331 - -
Mibi13g1284 582 MobiDBLite consensus disorder prediction 556 582 - -
Mibi13g1284 582 Gene3D Transferase(Phosphotransferase) domain 1 332 537 - -
Mibi13g1284 582 FunFam serine/threonine-protein kinase PBS1-like 227 331 - -
Mibi13g1284 582 Pfam Protein tyrosine and serine/threonine kinase 260 527 IPR001245 GO:0004672|GO:0006468
Mibi13g1284 582 ProSitePatterns Serine/Threonine protein kinases active-site signature. 377 389 IPR008271 GO:0004672|GO:0006468
Mibi13g1284 582 FunFam PR5-like receptor kinase 332 539 - -
Mibi13g1284 582 CDD STKc_IRAK 263 528 - -
Mibi13g1284 582 SMART serkin_6 257 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1284 Mibi-ChrMibi13 18061067 18072895 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1284 211 568 Receptor kinase-like Gene Family AT4G18250 47.043 4.60e-110 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mibi13g1284 PK_Tyr_Ser-Thr 4.4e-48 CL0016