Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mibi13g1260 | ATGTTACCAACTTATCCTTATTCCCTTTCTTCTTCTTCTAATTCCAATTCTACTTATTATTCTACTATGCCTATTATAGATCTTAATATTGTTGATGATCAAAGCCATGAGCTAATTTTTAGCCCAACCCATCAACCTTCTTCATCCTCTTCTTCTCTATCATCATGCCCTATTCTCTTTAGCCCTTCTCATCATCATCAAGATCACGCTGGATCTTCCCACTGGGAGTCCAAGAACTTACAAAATGATCATGACGAGGCTTCTGGGAGGCATATTATTGCTTCAAGAGGATCATGGAATGATCCAGATCAAGAAGAGAAGGGTGGTGGTGTTGAGATGATCAGAAAGAGTAGAGGCCTGAAACTGAAAGTTTGGAAGAGATCATCAGCAGCATCAGGATCATTAGAGAAGGAGGACAATGATGAAAATCATAATCATAATCATAATCAAACTGAGGATAATAATGATTCAGCGATGAAGTGGATGCCTTCAAAGATGAGAATGATGAGGAAGATGATGGTGGCTTCTTCAGATCATAATCATATAAGTAAGGCTTCTTCCTCAACTTCTTCAGAAGATCAGAATCAAGGAAGATCATCATTATTGTCTCCTAGAGGCACTGATCATAATAGCAGCAGCAGCAGCAACAATTCTTCAACCCACAGTAACAGTAATAATCATAGTAATCATATTACTGTTAGGGTTTGTTCTGATTGCCACACCACCAAGACCCCTCTTTGGAGAAGTGGACCAAGAGGTCCTAAGTCTCTATGCAACGCATGTGGGATTCGACAAAGGAAAGCGAGGCGAGCCATGGCGGCTGCGGCTGCAATTGGTGGGTCGCCGGATCTGAAGGCGGCGGCTGAGAAGTCTACGGTGAAAGGGACTGCTTATAAGGTTCATGGAAACAAAGGGAAGAAGTTGAAATTGGAGTGTGAGAATCATCATCAGATGAAGAAGAAGAAGAAGCACAAGTTTGAAGATTATGATGATCATCATCAAGCCAAGGAAGTTAATGATAATGGTATTCATTATAACAATAATTCAAGAGGGAAATCATCATCATCATCAATAATAAACAAGTTTAGCTTTGAGGATTTCACAGTGAGCTTGATGGGTAAGAATTTGGCAGCTGCATCACAAGTTTTCCCTCAAGATGAGAAGGAGGCTGCAATTCTTCTTATGGCTTTATCTTGCAATGGCCTTGTTCATGGATAG | 1218 | 0.4048 | MLPTYPYSLSSSSNSNSTYYSTMPIIDLNIVDDQSHELIFSPTHQPSSSSSSLSSCPILFSPSHHHQDHAGSSHWESKNLQNDHDEASGRHIIASRGSWNDPDQEEKGGGVEMIRKSRGLKLKVWKRSSAASGSLEKEDNDENHNHNHNQTEDNNDSAMKWMPSKMRMMRKMMVASSDHNHISKASSSTSSEDQNQGRSSLLSPRGTDHNSSSSSNNSSTHSNSNNHSNHITVRVCSDCHTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAAAAAIGGSPDLKAAAEKSTVKGTAYKVHGNKGKKLKLECENHHQMKKKKKHKFEDYDDHHQAKEVNDNGIHYNNNSRGKSSSSSIINKFSFEDFTVSLMGKNLAAASQVFPQDEKEAAILLMALSCNGLVHG | 405 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mibi13g1260 | 405 | MobiDBLite | consensus disorder prediction | 40 | 61 | - | - | |
Mibi13g1260 | 405 | CDD | ZnF_GATA | 235 | 263 | IPR000679 | GO:0006355|GO:0043565 | |
Mibi13g1260 | 405 | PANTHER | GATA TRANSCRIPTION FACTOR 22-RELATED | 3 | 404 | - | - | |
Mibi13g1260 | 405 | Gene3D | - | 228 | 283 | IPR013088 | GO:0006355|GO:0008270 | |
Mibi13g1260 | 405 | MobiDBLite | consensus disorder prediction | 100 | 119 | - | - | |
Mibi13g1260 | 405 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 232 | 269 | - | - | |
Mibi13g1260 | 405 | MobiDBLite | consensus disorder prediction | 176 | 229 | - | - | |
Mibi13g1260 | 405 | MobiDBLite | consensus disorder prediction | 179 | 229 | - | - | |
Mibi13g1260 | 405 | ProSiteProfiles | GATA-type zinc finger domain profile. | 234 | 266 | IPR000679 | GO:0006355|GO:0043565 | |
Mibi13g1260 | 405 | MobiDBLite | consensus disorder prediction | 132 | 153 | - | - | |
Mibi13g1260 | 405 | SMART | GATA_3 | 230 | 281 | IPR000679 | GO:0006355|GO:0043565 | |
Mibi13g1260 | 405 | ProSitePatterns | GATA-type zinc finger domain. | 236 | 261 | IPR000679 | GO:0006355|GO:0043565 | |
Mibi13g1260 | 405 | Pfam | GATA zinc finger | 236 | 269 | IPR000679 | GO:0006355|GO:0043565 | |
Mibi13g1260 | 405 | MobiDBLite | consensus disorder prediction | 40 | 158 | - | - | |
Mibi13g1260 | 405 | MobiDBLite | consensus disorder prediction | 67 | 91 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mibi13g1260 | Mibi-ChrMibi13 | 17427555 | 17429407 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mibi13g1260 | 158 | 405 | C2C2-Gata Transcription Factor Family | AT4G26150 | 37.795 | 1.45e-31 | 121 |