Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1247 ATGGACACTGTCTTCTCCCTCCCTGAACCTGCCAGAGCTCATTTTCTGCAGTCTATATTGCAATCCTTAAGCTGCTCTTACATTTGTCTTTGCCGAATTCCAGGACTGGCCTTCAAGAACCGCAGCTACCTGGAGTTGCAGCAACCGGATCTTCTAAGACTGGCATGGACACAAATACAGGCACAATTTTATCAGGAAGCAAGGATTAAGACTGCTGTCTTCATGGGTTGCAACAATGGAGAAATGGAACTTGGCTTCCCAAACATGTCTCAAGATGACATTCAAACAGCACTAAGGAATTGGTTCCCAGATGACTTTTCCAGATTTCAATCATTATCAAATCAGCAGCAGCAACCAAATATGGATCAGAGTCAGAACCCACCAACATCATCATCATCTTCATTAAGATCACTCTCATTATCTGCAGGAAGCCCTGAATACTCATCTCTTCTCTTCACCATTCCTGGATCTTCCCCTCATTTCCCTCATCCTCCTCCTCCTCCTCCTCAAGATAGCCAATCCCATCTCACACCTTCTTCTTCTTCTAGCCCTCACCACCATAATCAAGTGATCCAAGCACTAGCTCAAGTCACAACACAGAGCCCATTCCCCACATCAGAAACAGAAAATGATGCCATTATGAGAGCAATCCTTCATGTCCTTTCTACTAACAATTCTTCATCACCTTCTTCTTCAACCTCCCTTCATCCTCATCCTCATCTTCATCAGAATTTGCCTGATAATTATATGGTTCATCCTGATCAGGCCAGTGCCTTCAAGAGGTACAGCCCCGGAGTTATCCTTCTGCCTCCACCTCCGCCGCCATTATCATCCCAATTGGGGGGGCAAGATCAACAACAACAACAACAATTAAGAAGGAGGCAGAGTTTGTTTAAGAGGTCATTGACATTCTTTAGAGGGTTGAATTTCATGAGAATGAGAGAACGTATTCAGACAACTCGCCCCACCAGCGCTACACAGCTTCATCACATGATTTCTGAAAGAAGAAGGCGTGAAAAGCTCAATGAGAACTTTCAGGCTCTTAGATCTCTTCTTCCTCCTGGAACCAAGAAGGACAAAGCTTCCATACTTACAACAGCGAAAGAAGCAGTGAGCTCATTAATGGAGGAGATAGAAAAGCTTAGAGAGAGGAACAAACAACTAGAGGCAGCAACATCATCATCCTCCTCATCAATGGTGGTGGCGGCTCCTACTACAACTCCATCTGTAAAAGAAGCAGAAAATGAAATCGTAAATGAAAGATTAAATGTGAGAATTATTACTTTTGGCGAACCACCTGAATCAGCAAGTTCTTCTTCGTCATCATCTGAAGGGAGGATCGTAGATGTGGAAGTGAACGTAAGAGGAGAAACTTCTTCTCAAATAGATATTCTGATTCGATTATTGGGATTTCTCAAACAGCATCAAAATCTGAACTTGATTTCCATGGAAGCTAACACTCTTTTAGCTCACTCCACTTCCTTCAATCGAATTAACCTTAGACTCAGGGTTGAGGGAAGTGAATGGGACGAATCTGCCTTCCAGGAAGCAGTGAGAAGAGTGGTTGCTGATCTGGCACAGTGA 1584 0.4369 MDTVFSLPEPARAHFLQSILQSLSCSYICLCRIPGLAFKNRSYLELQQPDLLRLAWTQIQAQFYQEARIKTAVFMGCNNGEMELGFPNMSQDDIQTALRNWFPDDFSRFQSLSNQQQQPNMDQSQNPPTSSSSSLRSLSLSAGSPEYSSLLFTIPGSSPHFPHPPPPPPQDSQSHLTPSSSSSPHHHNQVIQALAQVTTQSPFPTSETENDAIMRAILHVLSTNNSSSPSSSTSLHPHPHLHQNLPDNYMVHPDQASAFKRYSPGVILLPPPPPPLSSQLGGQDQQQQQQLRRRQSLFKRSLTFFRGLNFMRMRERIQTTRPTSATQLHHMISERRRREKLNENFQALRSLLPPGTKKDKASILTTAKEAVSSLMEEIEKLRERNKQLEAATSSSSSSMVVAAPTTTPSVKEAENEIVNERLNVRIITFGEPPESASSSSSSSEGRIVDVEVNVRGETSSQIDILIRLLGFLKQHQNLNLISMEANTLLAHSTSFNRINLRLRVEGSEWDESAFQEAVRRVVADLAQ 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1247 527 MobiDBLite consensus disorder prediction 112 155 - -
Mibi13g1247 527 MobiDBLite consensus disorder prediction 269 290 - -
Mibi13g1247 527 MobiDBLite consensus disorder prediction 386 412 - -
Mibi13g1247 527 Gene3D - 325 398 IPR036638 GO:0046983
Mibi13g1247 527 Coils Coil 364 391 - -
Mibi13g1247 527 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 57 524 IPR044658 -
Mibi13g1247 527 MobiDBLite consensus disorder prediction 158 173 - -
Mibi13g1247 527 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 327 393 IPR036638 GO:0046983
Mibi13g1247 527 Pfam Helix-loop-helix DNA-binding domain 329 374 IPR011598 GO:0046983
Mibi13g1247 527 MobiDBLite consensus disorder prediction 388 412 - -
Mibi13g1247 527 MobiDBLite consensus disorder prediction 112 188 - -
Mibi13g1247 527 CDD bHLH_AtbHLH_like 330 382 IPR045239 -
Mibi13g1247 527 MobiDBLite consensus disorder prediction 174 188 - -
Mibi13g1247 527 SMART finulus 331 380 IPR011598 GO:0046983
Mibi13g1247 527 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 325 374 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1247 Mibi-ChrMibi13 17267610 17273073 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1247 1 526 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G56960 34.258 1.29e-77 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi13g1247 HLH 1.7e-10 No_clan