Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1244 ATGGAGGAAGCTCAATTGAAAACTTCAAAAACCTCTGAAAATTTAATGGGTTTTCCTCGTTTCCGTCGATCACATTTGATGAGTGGCACTTTTCATACCCTGGTTCGTATTTTCTCCCACTGTGGCAGTGAGTGCAGTCTACCTGACGCCATCGGAAATCATGATGCTTCTCAAGAGCTAAACAATCTTGACAATGGCATCGATGGATTGCGGCAAGAAAGCCAGGAGAAGGAGCCTGAGGACTTGCAATTTTCTGATATTGATCTTATGAATCTCGAGCATCGTGTATCCAATAAGGATAAACAGGTTCATGAGGGCTCTGATGGTAGGGAGTTTATGATGGGAGTAGACGAACATGAAGGCTCTACTGGAAGGCAGGATATGATGATTTATGAAAGAGAAAGTTTTGAGACCTTGTCCATGGGAACTGATAGTGTGGATAAAGAACAGAAGAAAATGGAAGAGTCAAATCAGATGTTGAAAGGAACTGAAGACCTTGTTGACAATGGCTCAGTTCCTTTGGACTTGGGATTAAGTGAAAACCAGAACGGAAGTAGTGAAGTTGACTTGATGGATTACCAAGTCGAGTATGTTGAATTTAGAGGATCAGATATCAACCCATCTGGAACTGAAAGTGAGTTATATATAGAAGAAGAATTTAATCAAAGTATGTCCGAAGGTTTTGATGCATCTTTAATTGCTAACATTCCAACACCTGAAAAAAGGGAAACCTCCTTACCTGAAATCTGTACATCAAGTATAAATCCTATAGTTGAAGGTGAGTTTGAGAAGGAAGAACGTGGTCAAGAGGTTCATCTAGCAACAAACCTTTCTGTAGATGATGATAAGAAGCATGGTGAACCATTTAATTTGAGTATTGAGCTCGAGAGACTAGAAAAGGAAATGGAATTGGTGAAACCTGATTCTGCTGCAGTTGTTTCTCTTCCTTCTACTGAAGAGGGTCAGCTTGAGAAGGAAGAACAGTGCTGTCAAAAAGTATGTGAGGCTATGGAATTTTCTGTTGATCAGAGTACAAATAATGAAGAATTAAATTCAAATGTAAAGCATAATAAACAAAAAAATGAAATAGACTTGGCACAACCTGTTTGTGCTGCAATGGTTTCTCTTCCTACTACCGAAGATGGTGAGTTTGAGAATGAAGAACGACATGGTCAAAAGGCTTCTGAAGCAATGCGTGTTTCTGTAGATCAGGCTATGAATAGTGAAGCATTGATTTCAAGTATGAAGCCCAATGGACAACAAAAGGAAATGGAATTGGTGAAACCTGTTTCTGCTGCTATTATTTCTCGTCCTTCCACTGAAGAGGGTGAGTTTAAGAAGGAAGAACAACAGGGGCAAAGGGCTCCTGAAGCAATGCAGTTTTCTATAGATCAGGATATGGATAATGAAGCATCAATTTTGCATATAAAACATGAGAAACAACAAAATGAAATGGACACATTGAAACCAGTTTGTACTGCAATTGTTTCTCTTCCTACTACCAAAGAGGGTGAGTTTGAGAAGGAGCAACGGTACGGCCAAAAGGTTCCTGAAGCAATGCACATTTCTGTAGATCAAGGTATGGATAGTGAGGCATTGATTTTTAAAAGAAAGCCCGAAAGACAACAAAGTGAGATGGAATTGGCGAAACCTGCTGGTACTGCAAGTGTTTCTCTTCCTCGTATTGAAGAGAATGAGCTTGACAAGGAAGAACATAATGGTAGTGATGGTTCCAAATTCCCTATGACATATGTAAGGAAGAGTAAAAAAATGGATTTGGGCCTCTTGAACCCATTATCAGAAAGAAATGTAGCAATGGACTTATCTGTAAATCAGGGTATTAATGGTGAAAGCAAAAACAGTGAAGAGATGTCATTCATGAACATTGATATTTTGGATGCTAAACATGTAATACAGCATGAAGAAGAGCAGCAAGAAAAAACAACTCATGCAAATGATTCAACATTTTCCAATCATCCAGATAAGGAAGAAAATATTGAAGAGGGAGAAGTTACTGGTGACTTTAGAATGGAGAATTCAATTGATGGGTCTTCTGCAGATTCTTTGATGATAGAACAGAGGAAACATGATGTACAAAATCCCGAACATGTTTTTGAAAATATAGTTGCTTTTAATATACAGAAAGAAGAAAAAGAAAAAAAATATGAATCAACTCAAGATACCTGTAACAGTGCACTAATGAAACCTAGGAAAATCTCTAAAAATGGGTTTCCAAACAGAGTTGACCTTGGAATTTCTCGGGAAATTATTGATTATGGGGATTTAGTAGATGATGGTTCTGTATTGGTGACTGGAAAAAGTGAAGACAGTCGAATTAAAGGGGTTGTTGGCTTGCCACCAACTTTGGCTGACAAAAAAGTCTTGCCCAAAGTCGTCTTGGAAGAAGAAGCTACTGAAGAACATCAAAACCCATCTGCAGTGAAGAAAGCTGGCAGCAGTTGCAAGAAAAAGCGTGGTTCTATGACTGAGGAAAGGAAGGCTAAAAAGAAGGAAAAGAAAAGAAAGCAGCGGGCAGAAAATAACCGAAAACTTGGTGTTAAAAGGTTGAAGTTGCTGCCAGTACAAAAGCCAAAGACTATCACATATTGCCACCATTATATGAAGGGACGCTGCCATGAGGGTGACAAGTGCAAGTTCTCACATGACACAGTGCCTCTGACAAAATCAAAGCCGTGCTGTCATTTTGCCCGTCACTCTTGCATGAAAGGTGATGATTGTCCATTTGATCATGAGCTCTCCAAGTATCCTTGTAGTAATTTTGTAACTAAAGGTTCTTGCAGCAGAGGGAATGCTTGTATGTTTTCACACCAGATTCCAGCCAAGCAAGATGTTGCTACATCTTCAAATGATAGCAAAGCTGAGTTGAAGCCTAAACTATTAGGAAATACAAAATTGAGTAAGCCACCTAACTTTAGCGGCTGCAGTGCTTCTCAGCAAAAAGTGATCCCTGATTCAAAAGGAATTCAATGCCACATCAGTTCGAAAAACATCAGTTCGGAAAAAGAGATGGCAGACACTGTAAAGAAACCACAGGCAATGATACCTAAAGGAATTAGTTTCATCAATGTTTCAAAATCATCATCTCCAAAACAAGGGATGATAACTCCAAATAAGGGAAATTCTGCTCAAATTGGGACAAGTACTGACCAAAGTGCATCTGATACATCTTTAAACTCAATGAATTCTGAGAAAACGCCAATGGTGGCACCTAAAGGAGTCAACTTTCTTTCATTTGGAAAAGGTCGCAGGTCCAGTTTCAAAAGTTCTGTTTGCTCCTTCTTACATAAGGAAAATAGCATTAAGTTCTCTCACAAAGAAAATTCAGGTACGCCTGAACAAGCATCTTTAGAGAAGGGTGATTGCAGTAAAGCTGGCAGTGGGACAAGACAAAGTGTACTACAGACTGCTGCATGCTCAAATGAGATTTTAAAGCAAAATCAATGTATAAAAGAGAAAATGGAATTGGGATTTCAAGGAAAAGCTTCAGTAGATCATTATAGTAATGATGTTCAGTCTGGCTCAACCTCCCATCAGGATCACAGACTTAGTAGATCAGTGGAAGAGGGAGTGCAGGCATATACTCCTCAAGCTTCAACTCTGATCTCATCTATGCTTCCAAATTCTCCATTTGTTTCAGGTCAATCTTCAGAACGCCTAGCATCTGGGCATCATAAGCACGTATTTAACTCAGCCCAAAGGGCATTGTTATCTACTCTATCATTCGCCGCAGAGAATGAGTCCAATATTAAGCTCAAGTTCCCTGTTGGTACATCTGCGATGAAATTAGAGATGGACAAGGATGTGTAG 3828 0.3926 MEEAQLKTSKTSENLMGFPRFRRSHLMSGTFHTLVRIFSHCGSECSLPDAIGNHDASQELNNLDNGIDGLRQESQEKEPEDLQFSDIDLMNLEHRVSNKDKQVHEGSDGREFMMGVDEHEGSTGRQDMMIYERESFETLSMGTDSVDKEQKKMEESNQMLKGTEDLVDNGSVPLDLGLSENQNGSSEVDLMDYQVEYVEFRGSDINPSGTESELYIEEEFNQSMSEGFDASLIANIPTPEKRETSLPEICTSSINPIVEGEFEKEERGQEVHLATNLSVDDDKKHGEPFNLSIELERLEKEMELVKPDSAAVVSLPSTEEGQLEKEEQCCQKVCEAMEFSVDQSTNNEELNSNVKHNKQKNEIDLAQPVCAAMVSLPTTEDGEFENEERHGQKASEAMRVSVDQAMNSEALISSMKPNGQQKEMELVKPVSAAIISRPSTEEGEFKKEEQQGQRAPEAMQFSIDQDMDNEASILHIKHEKQQNEMDTLKPVCTAIVSLPTTKEGEFEKEQRYGQKVPEAMHISVDQGMDSEALIFKRKPERQQSEMELAKPAGTASVSLPRIEENELDKEEHNGSDGSKFPMTYVRKSKKMDLGLLNPLSERNVAMDLSVNQGINGESKNSEEMSFMNIDILDAKHVIQHEEEQQEKTTHANDSTFSNHPDKEENIEEGEVTGDFRMENSIDGSSADSLMIEQRKHDVQNPEHVFENIVAFNIQKEEKEKKYESTQDTCNSALMKPRKISKNGFPNRVDLGISREIIDYGDLVDDGSVLVTGKSEDSRIKGVVGLPPTLADKKVLPKVVLEEEATEEHQNPSAVKKAGSSCKKKRGSMTEERKAKKKEKKRKQRAENNRKLGVKRLKLLPVQKPKTITYCHHYMKGRCHEGDKCKFSHDTVPLTKSKPCCHFARHSCMKGDDCPFDHELSKYPCSNFVTKGSCSRGNACMFSHQIPAKQDVATSSNDSKAELKPKLLGNTKLSKPPNFSGCSASQQKVIPDSKGIQCHISSKNISSEKEMADTVKKPQAMIPKGISFINVSKSSSPKQGMITPNKGNSAQIGTSTDQSASDTSLNSMNSEKTPMVAPKGVNFLSFGKGRRSSFKSSVCSFLHKENSIKFSHKENSGTPEQASLEKGDCSKAGSGTRQSVLQTAACSNEILKQNQCIKEKMELGFQGKASVDHYSNDVQSGSTSHQDHRLSRSVEEGVQAYTPQASTLISSMLPNSPFVSGQSSERLASGHHKHVFNSAQRALLSTLSFAAENESNIKLKFPVGTSAMKLEMDKDV 1275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1244 1275 FunFam C3H-type transcription factor 822 893 - -
Mibi13g1244 1275 ProSiteProfiles Zinc finger C3H1-type profile. 864 891 IPR000571 GO:0046872
Mibi13g1244 1275 MobiDBLite consensus disorder prediction 1032 1072 - -
Mibi13g1244 1275 MobiDBLite consensus disorder prediction 656 675 - -
Mibi13g1244 1275 SUPERFAMILY CCCH zinc finger 922 945 IPR036855 GO:0046872
Mibi13g1244 1275 MobiDBLite consensus disorder prediction 539 561 - -
Mibi13g1244 1275 MobiDBLite consensus disorder prediction 1110 1133 - -
Mibi13g1244 1275 Coils Coil 146 166 - -
Mibi13g1244 1275 Gene3D - 895 959 - -
Mibi13g1244 1275 MobiDBLite consensus disorder prediction 1173 1193 - -
Mibi13g1244 1275 SUPERFAMILY CCCH zinc finger 864 889 IPR036855 GO:0046872
Mibi13g1244 1275 MobiDBLite consensus disorder prediction 641 677 - -
Mibi13g1244 1275 SMART c3hfinal6 865 890 IPR000571 GO:0046872
Mibi13g1244 1275 SMART c3hfinal6 893 919 IPR000571 GO:0046872
Mibi13g1244 1275 SMART c3hfinal6 921 945 IPR000571 GO:0046872
Mibi13g1244 1275 MobiDBLite consensus disorder prediction 1032 1073 - -
Mibi13g1244 1275 Gene3D - 821 894 - -
Mibi13g1244 1275 Coils Coil 828 848 - -
Mibi13g1244 1275 MobiDBLite consensus disorder prediction 803 852 - -
Mibi13g1244 1275 ProSiteProfiles Zinc finger C3H1-type profile. 893 920 IPR000571 GO:0046872
Mibi13g1244 1275 ProSiteProfiles Zinc finger C3H1-type profile. 923 946 IPR000571 GO:0046872
Mibi13g1244 1275 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI 483 1262 IPR045124 GO:0003723|GO:0045892
Mibi13g1244 1275 Coils Coil 53 73 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mibi13g1244 None None None