Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1243 ATGGCCGGAATAATCGAACTAGTCAAATCGGAGCAAATAATCCTCACCGACGAAGGCGAACAAAACGACGGCGTTTTCAGTGAGGAATCGGAGAAGAAGAGCTCGCAAGTGACGACTGAGGAGGAAGATTTCACTGAACCGGGTTCACCGGTTCGTGTCAAGACCGAAGGGCCGGTCCGACCGGTCGATGATGATGATGATGATGATGGCGGTGATAATCGGCCGGTTTTGTTCCCGAAGCCGATGGAAGGGTTGAACGAGGTGGGCCCACCGCCGTTTCTGAAGAAGACATATGAGATGGTTGAGGATCCGGTAACCGACTCGATTGTGTCTTGGAGTGAAGCTCGTGATAGTTTTATCGTTTGGGATTCTCATGAGTTTTCTAGGATTCTTCTCCCTAAGTACTTTAAACACAGCAATTTCTCCAGCTTCATTCGCCAGCTTAATACATATGGATTTAGGAAGGTTGATTCAGACCGTTGGGAGTTTGCGAACGAAGGATTCCAGGGTGGGAAGAAGCATTTGCTGAAGAACATTAGGAGGAGAAGCAAGTATAACAAATTGCAACAAGGAGGAGGAGCATTGATGACTTCTATGAAACCTGGGTTGGAGGATGAAGTTGAGAAACTGAGGAAAGATCAGAACTTCATGAAAGTGGAAATTCTGAAGCTGAGACAGCAACAAGAGACCACACAAGTTCATCTTGTAAATGTTCAAGAGCGTGTCCGGTCTGCTGAGTTGAAGCAGTGCCAGATGATTTATTTCCTGACCAAAATGGCCAGAAGACCAACTTTGGTTCAGCAGTTAATTCAGAAGGTAAAGCGAAAAAGAGAACTCGGAGGGGGCGATATCAGTAAGAGACCTAGATTGCTTGGAACACAATGCCCTGTGAACTTCCCTAAGGCCATGGATAGTGCCAGCCCTGATGTTGATTATAGACAAAGTAATAAGGATTTGGCTTCATTGCAATCAGAGCTCAATGGACTCTTGTCTGAAACAGTGAGCTATAATAGCAGAATGCAACCTGCCACAGCCCCTTCTCTGAGAGGTGATGAACTTTGCAGTCTGGGATTAAGGACCGACAATTCGAGAGCGAGTGGGAACGATGTATCTTCTTCTGCGGCGTGCTGTATGATGTCGGAAAAACTGATGGAAGAGAACTCTGTTGTTGATGAAGGGCTTGATGTGAATGATTCAAATATCTATCTTGAATTGGAGGATTTGATTAGCAAACCAACTGACTGGGTTGGATCTGCAAGTGGATTGGTGGGGCAGACTGGTTGTATCTGA 1290 0.4597 MAGIIELVKSEQIILTDEGEQNDGVFSEESEKKSSQVTTEEEDFTEPGSPVRVKTEGPVRPVDDDDDDDGGDNRPVLFPKPMEGLNEVGPPPFLKKTYEMVEDPVTDSIVSWSEARDSFIVWDSHEFSRILLPKYFKHSNFSSFIRQLNTYGFRKVDSDRWEFANEGFQGGKKHLLKNIRRRSKYNKLQQGGGALMTSMKPGLEDEVEKLRKDQNFMKVEILKLRQQQETTQVHLVNVQERVRSAELKQCQMIYFLTKMARRPTLVQQLIQKVKRKRELGGGDISKRPRLLGTQCPVNFPKAMDSASPDVDYRQSNKDLASLQSELNGLLSETVSYNSRMQPATAPSLRGDELCSLGLRTDNSRASGNDVSSSAACCMMSEKLMEENSVVDEGLDVNDSNIYLELEDLISKPTDWVGSASGLVGQTGCI 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1243 429 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 79 313 IPR027725 -
Mibi13g1243 429 Pfam HSF-type DNA-binding 93 182 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi13g1243 429 Coils Coil 312 332 - -
Mibi13g1243 429 Gene3D - 86 183 IPR036388 -
Mibi13g1243 429 SUPERFAMILY "Winged helix" DNA-binding domain 89 182 IPR036390 -
Mibi13g1243 429 SMART hsfneu3 89 182 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi13g1243 429 Coils Coil 207 227 - -
Mibi13g1243 429 PRINTS Heat shock factor (HSF) domain signature 131 143 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi13g1243 429 PRINTS Heat shock factor (HSF) domain signature 93 116 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi13g1243 429 PRINTS Heat shock factor (HSF) domain signature 144 156 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi13g1243 429 MobiDBLite consensus disorder prediction 15 83 - -
Mibi13g1243 429 ProSitePatterns HSF-type DNA-binding domain signature. 132 156 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi13g1243 429 MobiDBLite consensus disorder prediction 25 49 - -
Mibi13g1243 429 FunFam Heat shock transcription factor 1 86 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1243 Mibi-ChrMibi13 17230712 17232605 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1243 79 293 HSF AT2G26150 55.251 2.73e-83 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mibi13g1243 HSF_DNA-bind 1.1e-32 CL0123