Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g1239 ATGACCAACGACATCGTCATTGGTTTTCTCATATTTAGCGTCCTTGTTGTGGCTGCCTCCGCCGGCAACTTCAACCAGGACTTCCAAGTCACATGGGGCGACGGCCGTGGCAAAGTCCTCGACGGCGGCCGCCTCCTTACCCTCTCCCTCGACAAATTCTCCGGCTCCGGCTTCCGCTCCGTTAACGATTACCTCTTCGCAAAGATTGACATGCAGCTCAAACTAGTCCCCGGCAACTCCGCTGGCACCGTCACCACTTATTATCTAAGCTCAGAGGGGGCAACTCATGATGAAATAGACTTTGAATTTCTGGGGAATTTGAGTGGAGATCCATATATTCTTCATACAAACATATTTACACAGGGAAAAGGTAACAGAGAGCAGCAGTTTTATTTGTGGTTTGATCCCACCGCCGACTTTCACACTTATTCTATTCTCTGGAATCCTCAAACCATCATATTCTCAGTGGATGGGAAAGCAATAAGGGAATTCAAGAACATGGAATCAAGAGGGATTCCATTTCCAAAGAACCAAGCAATGAGAATATATGGAAGCCTTTGGGATGCAGAAGATTGGGCCACCAGAGGAGGACTTGTGAAGACTGATTGGACCAAAGCTCCTTTCATTGCCTCTTTCAGAGACTTCACTGCTCAAACCACCACCGCCCGCGGTGGCTCCGGCGACCAATCGTGGCTGAAACAGTCGCTGGACACGGCGGGGCAAGCAAGTATGAAGGAGCTGCAGAAGAAATATATGATATATAACTATTGTACTGATACAAAGAGATTCCCTCAAGGCATCCCTCTTGAATGCTCTCTCTAG 822 0.4818 MTNDIVIGFLIFSVLVVAASAGNFNQDFQVTWGDGRGKVLDGGRLLTLSLDKFSGSGFRSVNDYLFAKIDMQLKLVPGNSAGTVTTYYLSSEGATHDEIDFEFLGNLSGDPYILHTNIFTQGKGNREQQFYLWFDPTADFHTYSILWNPQTIIFSVDGKAIREFKNMESRGIPFPKNQAMRIYGSLWDAEDWATRGGLVKTDWTKAPFIASFRDFTAQTTTARGGSGDQSWLKQSLDTAGQASMKELQKKYMIYNYCTDTKRFPQGIPLECSL 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g1239 273 PIRSF EndGlu_transf 2 273 IPR016455 GO:0010411|GO:0016762|GO:0042546
Mibi13g1239 273 Gene3D - 11 273 - -
Mibi13g1239 273 ProSitePatterns Glycosyl hydrolases family 16 active sites. 98 108 IPR008263 GO:0004553|GO:0005975
Mibi13g1239 273 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 18 212 IPR000757 GO:0004553|GO:0005975
Mibi13g1239 273 FunFam Xyloglucan endotransglucosylase/hydrolase 11 273 - -
Mibi13g1239 273 Pfam Glycosyl hydrolases family 16 25 205 IPR000757 GO:0004553|GO:0005975
Mibi13g1239 273 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 272 IPR013320 -
Mibi13g1239 273 CDD GH16_XET 19 271 IPR016455 GO:0010411|GO:0016762|GO:0042546
Mibi13g1239 273 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 18 271 IPR044791 GO:0004553
Mibi13g1239 273 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 228 271 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g1239 Mibi-ChrMibi13 17195931 17198274 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g1239 6 271 Glycoside Hydrolase AT4G25810 66.304 8.02e-137 385